RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TMCO2Q7Z6W1 182 aaPredicted RBP1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 COMTD1Q86VU5 262 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 C3orf22Q8N5N4 141 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 FAM184AQ8NB25 1140 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 PROKR2Q8NFJ6 384 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 BPIFB6Q8NFQ5 453 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 CERS2Q96G23 380 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 SMIM8Q96KF7 97 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 PPP1R36Q96LQ0 422 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 UBE2E2Q96LR5 201 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 IGF2BP2-AS1Q96M15 143 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 TMED9Q9BVK6 235 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 HIGD2AQ9BW72 106 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 SRRQ9GZT4 340 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 AP3M1Q9Y2T2 418 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 PPIL1Q9Y3C6 166 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 ORC6Q9Y5N6 252 aa1.41□□□□□ -2.18
ECHDC1-213ENST00000474240 H0YIV9 168 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 UPK2O00526 184 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 CASC3O15234 703 aaKnown RBP1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 GATCO43716 136 aaKnown RBP1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 OR2A4O95047 310 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 CPSF4O95639 269 aaKnown RBP1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 IGHV3-53P01767 116 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 KLK1P06870 262 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 SEC11BP0C7V7 166 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 GABRR2P28476 465 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 SLC18A1P54219 525 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 IL5RAQ01344 420 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 PMVKQ15126 192 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 LINC00303Q3SY05 128 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 UBE2NLQ5JXB2 153 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 LIN9Q5TKA1 542 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 CLEC2AQ6UVW9 174 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 Q6ZQT7 251 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 LINC00336Q6ZUF6 198 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 CYP4Z2PQ8N1L4 340 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 EIF4E3Q8N5X7 224 aaKnown RBP1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 ZFP62Q8NB50 900 aaPredicted RBP1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 FAM57AQ8TBR7 257 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 ITLN2Q8WWU7 325 aaPredicted RBP1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 OR2A7Q96R45 310 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 METTL26Q96S19 204 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 DSN1Q9H410 356 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 SDHAF3Q9NRP4 125 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 CA10Q9NS85 328 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 NLE1Q9NVX2 485 aaPredicted RBP1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 AHSPQ9NZD4 102 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 FLVCR2Q9UPI3 526 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 INSIG2Q9Y5U4 225 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 KIAA1671Q9BY89 1806 aa1.4□□□□□ -2.19
ECHDC1-213ENST00000474240 BRCA1P38398 1863 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 MYBPHLA2RUH7 354 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 C17orf51A8MQB3 221 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SEC14L6B5MCN3 397 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 H3BQ85 93 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 J3QT63 122 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SIVA1O15304 175 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 COX7A2P2O60397 106 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 IGHMP01871 453 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 RHOCP08134 193 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 OR5AL1P0C617 328 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 STAG3L3P0CL85 134 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SCGB1C2P0DMR2 95 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 TEAD1P28347 426 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 CRABP2P29373 138 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 FUSP35637 526 aaKnown RBP eCLIP1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 BCAP31P51572 246 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 ATP6V0D1P61421 351 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SLC35B1P78383 322 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 IRF8Q02556 426 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SPAG1Q07617 926 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 ENDOGQ14249 297 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 TSC22D1Q15714 1073 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 ATP6V1FQ16864 119 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 PDZD11Q5EBL8 140 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SYT6Q5T7P8 510 aaPredicted RBP1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 KCTD16Q68DU8 428 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF773Q6PK81 442 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 MRPL21Q7Z2W9 205 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 TMEM144Q7Z5S9 345 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SCGB1C1Q8TD33 95 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 RILPQ96NA2 401 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 YPEL4Q96NS1 127 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SND1-IT1Q9HBX3 110 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 VCX3AQ9NNX9 186 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 PEF1Q9UBV8 284 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 TFR2Q9UP52 801 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 KLF12Q9Y4X4 402 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 SHANK1Q9Y566 2161 aa1.39□□□□□ -2.19
ECHDC1-213ENST00000474240 UPK1AO00322 258 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 ENTPD6O75354 484 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 CBR1P16152 277 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 CSKP41240 450 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 HCCSP53701 268 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 FOXA1P55317 472 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 CCL23P55773 120 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 CLDN8P56748 225 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms