RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SGTBQ96EQ0 304 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 MSANTD3Q96H12 275 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 HYLS1Q96M11 299 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 C20orf27Q9GZN8 174 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 SLIRPQ9GZT3 109 aaKnown RBP2.97□□□□□ -1.93
BRCA1-212ENST00000473961 NXF2Q9GZY0 626 aaKnown RBP2.97□□□□□ -1.93
BRCA1-212ENST00000473961 ING2Q9H160 280 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 SPNS1Q9H2V7 528 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 TMEM38AQ9H6F2 299 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 PDFQ9HBH1 243 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 ACP6Q9NPH0 428 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 PLSCR3Q9NRY6 295 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 AGPAT4Q9NRZ5 378 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 PRR34Q9NV39 138 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 FBXL12Q9NXK8 326 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 ADA2Q9NZK5 511 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 IL17CQ9P0M4 197 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 NYAP2Q9P242 653 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 DEC1Q9P2X7 70 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 CYB5R1Q9UHQ9 305 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 TRAPPC4Q9Y296 219 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 ACOT9Q9Y305 439 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 NDUFAF1Q9Y375 327 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 CBY1Q9Y3M2 126 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 RHBDD3Q9Y3P4 386 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 HSPE1-MOB4S4R3N1 261 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 ADAMTSL3P82987 1691 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 DLEC1Q9Y238 1755 aa2.97□□□□□ -1.93
BRCA1-212ENST00000473961 TANC1Q9C0D5 1861 aa2.96□□□□□ -1.93
BRCA1-212ENST00000473961 PKD1L3Q7Z443 1732 aa2.96□□□□□ -1.93
BRCA1-212ENST00000473961 TRPM3Q9HCF6 1732 aaPredicted RBP2.96□□□□□ -1.93
BRCA1-212ENST00000473961 AFDNP55196 1824 aaKnown RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 PLCH1Q4KWH8 1693 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 A0A1B0GW55 424 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 FAM92AA1XBS5 289 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 OR6C70A6NIJ9 312 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 METTL15A6NJ78 407 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 ARGFXA6NJG6 315 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 CLDN24A6NM45 220 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 ERI2A8K979 691 aaKnown RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 GABRR3A8MPY1 467 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 KRBOX1C9JBD0 128 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 SNAPC5O75971 98 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 AQP8O94778 261 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 PROSCO94903 275 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 LYPLA2O95372 231 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 HPRT1P00492 218 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 MOSP00540 346 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 IFNA7P01567 189 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 IFNA4P05014 189 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 IL6P05231 212 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 FABP3P05413 133 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 FABP1P07148 127 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 CRYGCP07315 174 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DUX4L2P0CJ85 424 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DUX4L3P0CJ86 424 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DUX4L4P0CJ87 422 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DUX4L5P0CJ88 424 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DUX4L6P0CJ89 424 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DUX4L7P0CJ90 424 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 GGT1P19440 569 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 OMGP23515 440 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 S100PP25815 95 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 HOXA6P31267 233 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 NMUP48645 174 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 UBE2AP49459 152 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 RAB13P51153 203 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 SLC7A9P82251 487 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 CDH17Q12864 832 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 PSG7Q13046 419 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DAZ2Q13117 558 aaKnown RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 BTN1A1Q13410 526 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 GINS1Q14691 196 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF726P1Q15940 193 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF630Q2M218 657 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 HNRNPA1L2Q32P51 320 aaKnown RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 PTPN20Q4JDL3 420 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 TEX30Q5JUR7 227 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 TPRG1LQ5T0D9 272 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 SYT6Q5T7P8 510 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 FAM45BPQ6NSW5 357 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 DUX4L9Q6RFH8 374 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 IL34Q6ZMJ4 242 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 MBOAT2Q6ZWT7 520 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 MRPL21Q7Z2W9 205 aaKnown RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 MRPL55Q7Z7F7 128 aaKnown RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 GALNT10Q86SR1 603 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 PRSS58Q8IYP2 241 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 C8orf59Q8N0T1 100 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-212ENST00000473961 STX19Q8N4C7 294 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 GDPD1Q8N9F7 314 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 LRRC75AQ8NAA5 344 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF555Q8NEP9 628 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 OR4M2Q8NGB6 313 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 OR4M1Q8NGD0 313 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 OR56A4Q8NGH8 313 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 ITFG1Q8TB96 612 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 FAM45AQ8TCE6 357 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 RORBQ92753 470 aa2.96□□□□□ -1.94
BRCA1-212ENST00000473961 RBPMSQ93062 196 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms