RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MTCH1Q9NZJ7 389 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 PSORS1C1Q9UIG5 152 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 RPUSD1Q9UJJ7 312 aaKnown RBP15.65■□□□□ 0.1
PTCD3-210ENST00000473829 NUP50Q9UKX7 468 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 MAB21L2Q9Y586 359 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 SOX21Q9Y651 276 aaPredicted RBP15.65■□□□□ 0.1
PTCD3-210ENST00000473829 TRBV2A0A0J9YWF9 115 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 RFPL4AA6NLU0 287 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 RNF212BA8MTL3 300 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 RFPL4AL1F8VTS6 287 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 NXPH2O95156 264 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 MYL12AP19105 171 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 SCGB2A2Q13296 93 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 TUSC1Q2TAM9 212 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 SMIM21Q3B7S5 101 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 TMPRSS11AQ6ZMR5 421 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 AHSA2Q719I0 299 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 BCL6BQ8N143 479 aaPredicted RBP15.64■□□□□ 0.09
PTCD3-210ENST00000473829 ZNF485Q8NCK3 441 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 ZNRF1Q8ND25 227 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 DNAAF1Q8NEP3 725 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 BPIFB6Q8NFQ5 453 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 SLAMF9Q96A28 289 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 TBX15Q96SF7 602 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 COMMD4Q9H0A8 199 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 SIRPDQ9H106 197 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 PLCXD1Q9NUJ7 323 aa15.64■□□□□ 0.09
PTCD3-210ENST00000473829 CNOT2Q9NZN8 540 aaKnown RBP15.64■□□□□ 0.09
PTCD3-210ENST00000473829 EFCAB10A6NFE3 127 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 ZNF879B4DU55 563 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 H0YJX3 145 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 INMTO95050 263 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 ECDO95905 644 aaPredicted RBP15.63■□□□□ 0.09
PTCD3-210ENST00000473829 LRRC10Q5BKY1 277 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 RPL22L1Q6P5R6 122 aaKnown RBP15.63■□□□□ 0.09
PTCD3-210ENST00000473829 CRIP3Q6Q6R5 217 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 SLC25A26Q70HW3 274 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 PHC2Q8IXK0 858 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 PNLDC1Q8NA58 520 aaKnown RBP15.63■□□□□ 0.09
PTCD3-210ENST00000473829 LY6G5BQ8NDX9 201 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 OR52N1Q8NH53 320 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 HAVCR2Q8TDQ0 301 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 GATAD2BQ8WXI9 593 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 SDSLQ96GA7 329 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 MED30Q96HR3 178 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 SPACA5Q96QH8 159 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 PCGF1Q9BSM1 259 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 DCTN5Q9BTE1 182 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 FKBP14Q9NWM8 211 aa15.63■□□□□ 0.09
PTCD3-210ENST00000473829 SLC25A10Q9UBX3 287 aaPredicted RBP15.63■□□□□ 0.09
PTCD3-210ENST00000473829 LIPFP07098 398 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 C21orf33P30042 268 aaPredicted RBP15.62■□□□□ 0.09
PTCD3-210ENST00000473829 RBP2P50120 134 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 C11orf91Q3C1V1 193 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 CCDC58Q4VC31 144 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 ASPHD2Q6ICH7 369 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 BPIFB2Q8N4F0 458 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 TSEN15Q8WW01 171 aaKnown RBP15.62■□□□□ 0.09
PTCD3-210ENST00000473829 TMEM158Q8WZ71 300 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 H1FXQ92522 213 aaKnown RBP15.62■□□□□ 0.09
PTCD3-210ENST00000473829 RFT1Q96AA3 541 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 SPSB1Q96BD6 273 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 CEP19Q96LK0 163 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 WDFY2Q96P53 400 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 OPALINQ96PE5 141 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 BABAM2Q9NXR7 383 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 DHDHQ9UQ10 334 aa15.62■□□□□ 0.09
PTCD3-210ENST00000473829 H0YHG0 523 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 OGG1O15527 345 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 SPRY1O43609 319 aaPredicted RBP15.61■□□□□ 0.09
PTCD3-210ENST00000473829 TOX4O94842 621 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 MT-ND2P03891 347 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 NDUFB7P17568 137 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 PRKACBP22694 351 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 PRDX2P32119 198 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 NPBWR2P48146 333 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 SOX2P48431 317 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 POU3F4P49335 361 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 ATP1B3P54709 279 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 MTCP1P56278 107 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 CAV3P56539 151 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 HILS1P60008 231 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 ARF6P62330 175 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 LHFPL2Q6ZUX7 228 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 PARP16Q8N5Y8 322 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 ZFP41Q8N8Y5 198 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 TMEM185AQ8NFB2 350 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 OR13C5Q8NGS8 318 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 C8orf46Q8TAG6 207 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 ZNF418Q8TF45 676 aaPredicted RBP15.61■□□□□ 0.09
PTCD3-210ENST00000473829 ZNF48Q96MX3 618 aaPredicted RBP15.61■□□□□ 0.09
PTCD3-210ENST00000473829 ZCCHC4Q9H5U6 513 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 ESM1Q9NQ30 184 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 IL36RNQ9UBH0 155 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 OR14J1Q9UGF5 321 aa15.61■□□□□ 0.09
PTCD3-210ENST00000473829 GPR37O15354 613 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 KNG1P01042 644 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 C6orf141Q5SZD1 244 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 METTL11BQ5VVY1 283 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 RUSC1-AS1Q66K80 236 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms