RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SMIM10L2BP0DMW5 78 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 CXCL8P10145 99 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PYCR1P32322 319 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 ACVRL1P37023 503 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 OAZ1P54368 228 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SNRPD1P62314 119 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 LTBQ06643 244 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 LAMTOR4Q0VGL1 99 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 GPM6BQ13491 265 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PIP5KL1Q5T9C9 394 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 FKBP1CQ5VVH2 108 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 UNQ5815/PRO19632Q6UWF5 114 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 LRRC70Q7Z2Q7 622 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 KLHDC8AQ8IYD2 350 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 OR51D1Q8NGF3 324 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 OR5B3Q8NH48 314 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 MOAP1Q96BY2 351 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PRRC1Q96M27 445 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF607Q96SK3 696 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 EBPLQ9BY08 206 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 CST11Q9H112 138 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 CHODLQ9H9P2 273 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 HINT3Q9NQE9 182 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 TM7SF3Q9NS93 570 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 KIAA1456Q9P272 454 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC7A7Q9UM01 511 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PPP1R3CQ9UQK1 317 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SH2B3Q9UQQ2 575 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 KIAA1671Q9BY89 1806 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 NUP214P35658 2090 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 E9PLN8 166 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 IGSF6O95976 241 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 MT-CO2P00403 227 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 CSN2P05814 226 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ANXA4P09525 319 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF735P0CB33 412 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 STAG3L2P0CL84 134 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 CSNK2A2P19784 350 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 THPOP40225 353 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 GABRA2P47869 451 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ARRB1P49407 418 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 RAB38P57729 211 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 RPS11P62280 158 aaKnown RBP eCLIP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 RPS15P62841 145 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 BTN3A2P78410 334 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ACSM2AQ08AH3 577 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ADIGQ0VDE8 80 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 NFATC2Q13469 925 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 P2RY6Q15077 328 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 PLPPR5Q32ZL2 321 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM41BQ5BJD5 291 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 CTSL3PQ5NE16 218 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 FRG2Q64ET8 278 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ACSM2BQ68CK6 577 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 PPP1R32Q7Z5V6 425 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 DEFB128Q7Z7B8 93 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 CLDN19Q8N6F1 224 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 KLHDC1Q8N7A1 406 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 OR2T33Q8NG76 320 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 FRG2BQ96QU4 278 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 OR7D2Q96RA2 312 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 VKORC1Q9BQB6 163 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 NMNAT2Q9BZQ4 307 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 CNIH4Q9P003 139 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 PAM16Q9Y3D7 125 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 WDR45Q9Y484 360 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TBL2Q9Y4P3 447 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 SPACA6W5XKT8 324 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 SMCHD1A6NHR9 2005 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TRAV26-1A0A087WT03 109 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 A0A1W2PPK0 400 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 A0A1W2PS29 197 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TSPAN11A1L157 253 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF736B4DX44 427 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 RHBDL1O75783 438 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 CYB5AP00167 134 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 PRH1P02810 166 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 PSG1P11464 419 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 EDNRAP25101 427 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 CFPP27918 469 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 MPLP40238 635 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 PTGER3P43115 390 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC6A8P48029 635 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ACTL10Q5JWF8 245 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM156Q8N614 296 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF433Q8N7K0 673 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 OR8S1Q8NH09 359 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF563Q8TA94 476 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TSEN15Q8WW01 171 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 POM121L2Q96KW2 1035 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 MACROD1Q9BQ69 325 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 TPSD1Q9BZJ3 242 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC32A1Q9H598 525 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 SGK2Q9HBY8 427 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 FBXL17Q9UF56 701 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC22A13Q9Y226 551 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 VSIG4Q9Y279 399 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms