RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 SDSLQ96GA7 329 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 NRIP2Q9BQI9 281 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 PCGF1Q9BSM1 259 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DCTN5Q9BTE1 182 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 HES4Q9HCC6 221 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 AMBNQ9NP70 447 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4Q9UBX2 424 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 HHLA2Q9UM44 414 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 FAM230AA0A1W2PPH8 454 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 OR4C45A6NMZ5 311 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 CASQ2O14958 399 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 WBP4O75554 376 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 SFTPBP07988 381 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF20P17024 532 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 PEX2P28328 305 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 GABRA2P47869 451 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 UBE2V2Q15819 145 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 DGUOKQ16854 277 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 METAP1DQ6UB28 335 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 CALHM1Q8IU99 346 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 RDH10Q8IZV5 341 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF561Q8N587 486 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 OR52I1Q8NGK6 324 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 TRMT10AQ8TBZ6 339 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 BORCS8Q96FH0 119 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 TBX15Q96SF7 602 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF649Q9BS31 505 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 FGF20Q9NP95 211 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 MAB21L2Q9Y586 359 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 HSPE1-MOB4S4R3N1 261 aa10.68□□□□□ -0.7
SHROOM3-204ENST00000473602 IGHV3OR16-10A0A075B7F0 116 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 TRBV23-1A0A0A0MS06 115 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 TMEM212A6NML5 194 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 POM121CA8CG34 1229 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 H3BSH0 61 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 CLDN34H7C241 214 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 SLC1A7O00341 560 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 NXPH2O95156 264 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 CCDC159P0C7I6 412 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 SELLP14151 372 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 PRKACBP22694 351 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 DCKP27707 260 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 RBP2P50120 134 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 ERVK11-1P61568 191 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 ARF6P62330 175 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 C1orf122Q6ZSJ8 110 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 Q8IYB0 196 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 FGFRL1Q8N441 504 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 DHRSXQ8N5I4 330 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF676Q8N7Q3 588 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 TMEM185AQ8NFB2 350 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 NPRL2Q8WTW4 380 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 GATAD2BQ8WXI9 593 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 TAF15Q92804 592 aaKnown RBP eCLIP10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 SPSB1Q96BD6 273 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 ADAT3Q96EY9 351 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 C1orf147Q96MC9 270 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF48Q96MX3 618 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 COMMD4Q9H0A8 199 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
SHROOM3-204ENST00000473602 IGHV1-69DA0A0B4J2H0 117 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 RFPL4AA6NLU0 287 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 RFPL4AL1F8VTS6 287 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 H0YAE9 185 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 M0R1W7 72 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 KNG1P01042 644 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 IGHV1-69P01742 117 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 NDUFB7P17568 137 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 PRDX2P32119 198 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 GBX2P52951 348 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 ATP1B3P54709 279 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 ADARB1P78563 741 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 GUCA2AQ02747 115 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 BAMBIQ13145 260 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 SMN1Q16637 294 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 BRD3OSQ6XYD6 125 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 LHFPL2Q6ZUX7 228 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 ANGPTL5Q86XS5 388 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNRF1Q8ND25 227 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 OR13C3Q8NGS6 347 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 FGGYQ96C11 551 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 CEP19Q96LK0 163 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF488Q96MN9 340 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 FAM234AQ9H0X4 552 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 VCXQ9H320 206 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 DCLRE1BQ9H816 532 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 ISG20L2Q9H9L3 353 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 NEK6Q9HC98 313 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 NOX4Q9NPH5 578 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 ONECUT1Q9UBC0 465 aa10.66□□□□□ -0.7
SHROOM3-204ENST00000473602 IGKV1-27A0A075B6S5 117 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 IGKV1-9A0A0C4DH69 117 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 ZFPL1O95159 310 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 CLIC3O95833 236 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms