RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 KRT36O76013 467 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 INMTO95050 263 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 NXPH2O95156 264 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 ZNF3P17036 446 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 ALOX5APP20292 161 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 ATP6V1B2P21281 511 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 BLVRAP53004 296 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 ERVK11-1P61568 191 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 SNCBQ16143 134 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 KHDC1LQ5JSQ8 128 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 CYP2R1Q6VVX0 501 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 ZNF329Q86UD4 541 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 OR52N4Q8NGI2 321 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 OR13D1Q8NGV5 346 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 CDRT15Q96T59 188 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 VIPAS39Q9H9C1 493 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 IL36RNQ9UBH0 155 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 MAGEL2Q9UJ55 1249 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 BAIAP2Q9UQB8 552 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 IGHV2-26A0A0B4J1V2 119 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 A0A0U1RQV5 110 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 hCG_1809904A0A1W2PP81 198 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 A0A1W2PPE2 198 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 A0A1W2PPH5 198 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 A0A1W2PR64 198 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 A0A1W2PRV1 198 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 FAM172BPA6NC97 362 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 GMNNO75496 209 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 NRASP01111 189 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 IFNGP01579 166 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 SNRNP70P08621 437 aaKnown RBP10.02□□□□□ -0.81
TRAF4-209ENST00000473421 GDNFP39905 211 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 EDDM3BP56851 147 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 OR12D2P58182 307 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 MICAQ29983 383 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 SAMD4BQ5PRF9 694 aaKnown RBP10.02□□□□□ -0.81
TRAF4-209ENST00000473421 ASCC1Q8N9N2 400 aaKnown RBP10.02□□□□□ -0.81
TRAF4-209ENST00000473421 OR4P4Q8NGL7 312 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 TFAP2CQ92754 450 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 CHID1Q9BWS9 393 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 DGCR6LQ9BY27 220 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 PBOV1Q9GZY1 135 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 COPS3Q9UNS2 423 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 SLC22A13Q9Y226 551 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 U3KQK5 164 aa10.02□□□□□ -0.81
TRAF4-209ENST00000473421 IGKV1-27A0A075B6S5 117 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 TMEM269A0A1B0GVZ9 245 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 TCRBV5S2A0A599 114 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 IGHA1P01876 353 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 TTRP02766 147 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 H2AFXP16104 143 aaPredicted RBP10.01□□□□□ -0.81
TRAF4-209ENST00000473421 PAICSP22234 425 aaKnown RBP10.01□□□□□ -0.81
TRAF4-209ENST00000473421 SLC2A5P22732 501 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 MAGEA2P43356 314 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 RIPPLY1Q0D2K3 151 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 EDDM3AQ14507 147 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 TMEM42Q69YG0 159 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 COMMD2Q86X83 199 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 CPOQ8IVL8 374 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 ASCL2Q99929 193 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 CHST6Q9GZX3 395 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 CCDC134Q9H6E4 229 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 MTCH1Q9NZJ7 389 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 LSM4Q9Y4Z0 139 aaKnown RBP10.01□□□□□ -0.81
TRAF4-209ENST00000473421 KIAA2026Q5HYC2 2103 aa10.01□□□□□ -0.81
TRAF4-209ENST00000473421 A0A1B0GTI1 187 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 H0YHG0 523 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 H3BSH0 61 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 SRSF10O75494 262 aaKnown RBP10□□□□□ -0.81
TRAF4-209ENST00000473421 DUS4LO95620 317 aaKnown RBP10□□□□□ -0.81
TRAF4-209ENST00000473421 MRPL3P09001 348 aaKnown RBP10□□□□□ -0.81
TRAF4-209ENST00000473421 CALCBP10092 127 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 MPZP25189 248 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 THBS3P49746 956 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 ZNF684Q5T5D7 378 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 MINOS1Q5TGZ0 78 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 PLEKHG7Q6ZR37 379 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 KRT77Q7Z794 578 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 TMEM179BQ7Z7N9 219 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 ZNF676Q8N7Q3 588 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 TRMT10AQ8TBZ6 339 aaKnown RBP10□□□□□ -0.81
TRAF4-209ENST00000473421 NOL4LQ96MY1 436 aaPredicted RBP10□□□□□ -0.81
TRAF4-209ENST00000473421 ZNF714Q96N38 554 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 FEVQ99581 238 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 ZNF649Q9BS31 505 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 SLC25A33Q9BSK2 321 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 SAMHD1Q9Y3Z3 626 aaKnown RBP10□□□□□ -0.81
TRAF4-209ENST00000473421 PCDHGB5Q9Y5G0 923 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 MINOS1-NBL1R4GNA1 71 aa10□□□□□ -0.81
TRAF4-209ENST00000473421 PRR23D1E9PI22 279 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-209ENST00000473421 E9PQ18 207 aa9.99□□□□□ -0.81
TRAF4-209ENST00000473421 GSC2O15499 205 aa9.99□□□□□ -0.81
TRAF4-209ENST00000473421 PSPNO60542 156 aa9.99□□□□□ -0.81
TRAF4-209ENST00000473421 RBP4P02753 201 aa9.99□□□□□ -0.81
TRAF4-209ENST00000473421 ALDOBP05062 364 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms