RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CYB5R3P00387 301 aaPredicted RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 IGF2P01344 180 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 COX5BP10606 129 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 KITLGP21583 273 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 MAPK3P27361 379 aaPredicted RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 SRP9P49458 86 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 AKR1D1P51857 326 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 CTXN1P60606 82 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 RAP1BP61224 184 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 RPL27P61353 136 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 RAP1AP62834 184 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 FGL1Q08830 312 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 BTN1A1Q13410 526 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 PIN1Q13526 163 aaPredicted RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 IRF3Q14653 427 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 KLHL22Q53GT1 634 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 LAIR2Q6ISS4 152 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 LIN54Q6MZP7 749 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 FAHD1Q6P587 224 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 BAIAP2L2Q6UXY1 529 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 DLEU7Q6UYE1 221 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 CFAP77Q6ZQR2 320 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 Q6ZR03 302 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 RNF113BQ8IZP6 322 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 SPAG16Q8N0X2 631 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 OR5AS1Q8N127 324 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 OR10AD1Q8NGE0 317 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 OR5L1Q8NGL2 311 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 OR13G1Q8NGZ3 307 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 OR10A6Q8NH74 314 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 LIPHQ8WWY8 451 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 SLC25A46Q96AG3 418 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 HAVCR1Q96D42 359 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 BPIFA2Q96DR5 249 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 FAM71F1Q96KD3 344 aaPredicted RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 KCTD7Q96MP8 289 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 ZNF582Q96NG8 517 aaPredicted RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 NEDD4LQ96PU5 975 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 MGLLQ99685 303 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 CITED1Q99966 193 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 ZNF251Q9BRH9 671 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 NUDT16L1Q9BRJ7 211 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 PCGF1Q9BSM1 259 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 CHIAQ9BZP6 476 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 POLR2J2Q9GZM3 115 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 POLR2J3Q9H1A7 115 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 MMP28Q9H239 520 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 DPAGT1Q9H3H5 408 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 EXOSC4Q9NPD3 245 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 SDHAF2Q9NX18 166 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 C1RLQ9NZP8 487 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 HIF3AQ9Y2N7 669 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 MRPS7Q9Y2R9 242 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 SAMHD1Q9Y3Z3 626 aaKnown RBP5.78□□□□□ -1.48
CKS1B-205ENST00000473344 V9GYH0 126 aa5.78□□□□□ -1.48
CKS1B-205ENST00000473344 C7orf66A4D0T2 115 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 H3BUI4 141 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 AIPO00170 330 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 XKRYO14609 159 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 FABP7O15540 132 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 NDUFA7O95182 113 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 RAC2P15153 192 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 GALP22466 123 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 PITPNBP48739 271 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 TGM4P49221 684 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 GMFBP60983 142 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 RPL15P61313 204 aaKnown RBP5.77□□□□□ -1.49
CKS1B-205ENST00000473344 FGF12P61328 243 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 PAX2Q02962 417 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 ZNF91Q05481 1191 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 ST3GAL3Q11203 375 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 MLLT11Q13015 90 aaPredicted RBP5.77□□□□□ -1.49
CKS1B-205ENST00000473344 EXOSC2Q13868 293 aaKnown RBP5.77□□□□□ -1.49
CKS1B-205ENST00000473344 ENDOGQ14249 297 aaKnown RBP5.77□□□□□ -1.49
CKS1B-205ENST00000473344 TAF9Q16594 264 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 VMACQ2NL98 169 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 RNF212Q495C1 297 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 LAMTOR1Q6IAA8 161 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 UQCC3Q6UW78 93 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 Q6YL49 198 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 ZNF620Q6ZNG0 422 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 OAFQ86UD1 273 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 MOGAT3Q86VF5 341 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 Q8N402 240 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 TMEM86BQ8N661 226 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 OR4M1Q8NGD0 313 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 OR52H1Q8NGJ2 320 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 OR6M1Q8NGM8 313 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 OR51A7Q8NH64 312 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 TMEM163Q8TC26 289 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 SCARB1Q8WTV0 552 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 SSMEM1Q8WWF3 244 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 GATAD2BQ8WXI9 593 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 GGHQ92820 318 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 MARC2Q969Z3 335 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 ZNF583Q96ND8 569 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 TECTBQ96PL2 329 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 OR51E2Q9H255 320 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 POFUT1Q9H488 388 aa5.77□□□□□ -1.49
CKS1B-205ENST00000473344 SAV1Q9H4B6 383 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms