RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 BATF2Q8N1L9 274 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 SPICQ8N5J4 248 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 OR13F1Q8NGS4 319 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 OR13C5Q8NGS8 318 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 TRMT10AQ8TBZ6 339 aaKnown RBP10.92□□□□□ -0.66
TPM3-216ENST00000473036 NPRL2Q8WTW4 380 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 AQP3Q92482 292 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 DACT3Q96B18 629 aaPredicted RBP10.92□□□□□ -0.66
TPM3-216ENST00000473036 TMEM186Q96B77 213 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 PGLYRP3Q96LB9 341 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 OPALINQ96PE5 141 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 SMURF1Q9HCE7 757 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 ABCB9Q9NP78 766 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 HIF1ANQ9NWT6 349 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 CKLFQ9UBR5 152 aa10.92□□□□□ -0.66
TPM3-216ENST00000473036 SMIM31A0A1B0GVY4 71 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 A8MXK9 166 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 ZNF879B4DU55 563 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 SELLP14151 372 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 SRD5A1P18405 259 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 HNF1AP20823 631 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 HAAOP46952 286 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 GP2P55259 537 aaKnown RBP10.91□□□□□ -0.66
TPM3-216ENST00000473036 CR1LQ2VPA4 569 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 Q499Y3 187 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 FAM120AOSQ5T036 256 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 HAGHLQ6PII5 290 aaPredicted RBP10.91□□□□□ -0.66
TPM3-216ENST00000473036 DCDC5Q6ZRR9 648 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 MUC20Q8N307 709 aaPredicted RBP10.91□□□□□ -0.66
TPM3-216ENST00000473036 OR5T2Q8NGG2 359 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 OR10Z1Q8NGY1 313 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 OR51F2Q8NH61 342 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 ORAI1Q96D31 301 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 RAB39BQ96DA2 213 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 TECTBQ96PL2 329 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 HIST1H2AAQ96QV6 131 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 TMPRSS13Q9BYE2 586 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 SLITRK2Q9H156 845 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 SNTG1Q9NSN8 517 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 STUB1Q9UNE7 303 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 DHDHQ9UQ10 334 aa10.91□□□□□ -0.66
TPM3-216ENST00000473036 TRDV1A0A1B0GX56 115 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 FAM230AA0A1W2PPH8 454 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 RGS9O75916 674 aaPredicted RBP10.9□□□□□ -0.66
TPM3-216ENST00000473036 OCM2P0CE71 109 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 RPS2P15880 293 aaKnown RBP10.9□□□□□ -0.66
TPM3-216ENST00000473036 ATF1P18846 271 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 MPZP25189 248 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 FGF9P31371 208 aaPredicted RBP10.9□□□□□ -0.66
TPM3-216ENST00000473036 PSMD7P51665 324 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 TMBIM6P55061 237 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 STUMQ69YW2 141 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 ZNF529Q6P280 563 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 CD200R1LQ6Q8B3 271 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 UTS2BQ765I0 119 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 SERPINA12Q8IW75 414 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 OR5D14Q8NGL3 314 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 OR13C3Q8NGS6 347 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 PP6455Q8WZ26 134 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 CCL13Q99616 98 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 PLEKHA1Q9HB21 404 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 KCNS2Q9ULS6 477 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 PCDHB10Q9UN67 800 aa10.9□□□□□ -0.66
TPM3-216ENST00000473036 POLR3KQ9Y2Y1 108 aaPredicted RBP10.9□□□□□ -0.66
TPM3-216ENST00000473036 IGKV1D-17A0A075B6S4 117 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 PNMA8CA0A1B0GUJ8 204 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 C22orf46C9J442 243 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 ZNF701M0R085 212 aaPredicted RBP10.89□□□□□ -0.67
TPM3-216ENST00000473036 PGA5P0DJD9 388 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 SOX2P48431 317 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 ERVK11-1P61568 191 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 ACSM3Q53FZ2 586 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 WDR25Q64LD2 544 aaPredicted RBP10.89□□□□□ -0.67
TPM3-216ENST00000473036 ANKRD13BQ86YJ7 626 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 FAM216BQ8N7L0 139 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 OR51A2Q8NGJ7 313 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 OR13C9Q8NGT0 318 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 ANGPTL6Q8NI99 470 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 RAB2BQ8WUD1 216 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 TSEN15Q8WW01 171 aaKnown RBP10.89□□□□□ -0.67
TPM3-216ENST00000473036 NEIL1Q96FI4 390 aaPredicted RBP10.89□□□□□ -0.67
TPM3-216ENST00000473036 CPNE2Q96FN4 548 aaPredicted RBP10.89□□□□□ -0.67
TPM3-216ENST00000473036 SPACA5Q96QH8 159 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 TMED9Q9BVK6 235 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 FAM192AQ9GZU8 254 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 MTCH1Q9NZJ7 389 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 MIOXQ9UGB7 285 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 ZNF222Q9UK12 451 aa10.89□□□□□ -0.67
TPM3-216ENST00000473036 TRAV38-1A0A0B4J264 116 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 TRAV20A0A0B4J274 112 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 IGKV1-12A0A0C4DH73 117 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 TRBV5-5A0A0J9YX44 114 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 MEGF11A6BM72 1044 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 J3QT63 122 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 ADAM20O43506 726 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 AIREO43918 545 aa10.88□□□□□ -0.67
TPM3-216ENST00000473036 NOS1APO75052 506 aaPredicted RBP10.88□□□□□ -0.67
TPM3-216ENST00000473036 TMEM127O75204 238 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms