RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 IL24Q13007 206 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 TMED1Q13445 227 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 KPNB1Q14974 876 aaKnown RBP7.37□□□□□ -1.23
USF1-204ENST00000472217 UBE2V2Q15819 145 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 TP53I3Q53FA7 332 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 HCP5Q6MZN7 132 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 C17orf107Q6ZR85 190 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 FAM220AQ7Z4H9 259 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 OR5D13Q8NGL4 314 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 LINC01006Q8NI28 216 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 RNF166Q96A37 237 aaPredicted RBP7.37□□□□□ -1.23
USF1-204ENST00000472217 HRASLS5Q96KN8 279 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 PKIBQ9C010 78 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 CHST5Q9GZS9 411 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 IMPAD1Q9NX62 359 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 USE1Q9NZ43 259 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 OR14J1Q9UGF5 321 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 GNG8Q9UK08 70 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 VPREB3Q9UKI3 123 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.37□□□□□ -1.23
USF1-204ENST00000472217 E9PQ18 207 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 F8VVB4 439 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 F8VWA3 439 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 ANGPTL7O43827 346 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 ENTPD6O75354 484 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 TK1P04183 234 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 UBCP0CG48 685 aaKnown RBP7.36□□□□□ -1.23
USF1-204ENST00000472217 CCL3L1P16619 93 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 KRTAP10-3P60369 221 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 RPL31P62899 125 aaKnown RBP7.36□□□□□ -1.23
USF1-204ENST00000472217 ZIK1Q3SY52 487 aaPredicted RBP7.36□□□□□ -1.23
USF1-204ENST00000472217 MIDNQ504T8 468 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 TMEM200BQ69YZ2 307 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 BRICD5Q6PL45 260 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 GDPGP1Q6ZNW5 385 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 Q6ZSV7 163 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 CCDC121Q6ZUS5 278 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 MKXQ8IYA7 352 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 RDH10Q8IZV5 341 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 C11orf42Q8N5U0 333 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 OR4M1Q8NGD0 313 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 C17orf50Q8WW18 174 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 TRUB1Q8WWH5 349 aaKnown RBP7.36□□□□□ -1.23
USF1-204ENST00000472217 SLAMF9Q96A28 289 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 RNFT2Q96EX2 444 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 CEP19Q96LK0 163 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 ADI1Q9BV57 179 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 MTCH1Q9NZJ7 389 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 SLC7A11Q9UPY5 501 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 SF3B6Q9Y3B4 125 aaKnown RBP7.36□□□□□ -1.23
USF1-204ENST00000472217 RNF114Q9Y508 228 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 ORC6Q9Y5N6 252 aa7.36□□□□□ -1.23
USF1-204ENST00000472217 A0A1W2PPH5 198 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 DAPL1A0PJW8 107 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 J3QRE1 110 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 GATBO75879 557 aaKnown RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 INMTO95050 263 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 PIPP12273 146 aaPredicted RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 PAX6P26367 422 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 ALDH3A2P51648 485 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 FUT6P51993 359 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 OR12D2P58182 307 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 PROK1P58294 105 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 NANOS3P60323 173 aaKnown RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 SNRPGP62308 76 aaKnown RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 ACTC1P68032 377 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 ACTA1P68133 377 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 COL10A1Q03692 680 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 ZNF273Q14593 569 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 CNN3Q15417 329 aaKnown RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 OCLNQ16625 522 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 SLC25A30Q5SVS4 291 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 DHRS7BQ6IAN0 325 aaPredicted RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 ZFP1Q6P2D0 407 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 CBR4Q8N4T8 237 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 ASCC1Q8N9N2 400 aaKnown RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 ZSCAN4Q8NAM6 433 aaPredicted RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 BEND2Q8NDZ0 799 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 CCDC54Q8NEL0 328 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 OR2G2Q8NGZ5 317 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 OR5R1Q8NH85 324 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 PP6455Q8WZ26 134 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 C10orf35Q96D05 121 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 ADAT3Q96EY9 351 aaPredicted RBP7.35□□□□□ -1.23
USF1-204ENST00000472217 BORCS8Q96FH0 119 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 AJUBAQ96IF1 538 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 MBOAT4Q96T53 435 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 CITED1Q99966 193 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 FAM234AQ9H0X4 552 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 HEXA-AS1Q9H8Q6 139 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 FRRS1LQ9P0K9 344 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 AASSQ9UDR5 926 aa7.35□□□□□ -1.23
USF1-204ENST00000472217 IGKV1-9A0A0C4DH69 117 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 MEX3AA1L020 520 aaKnown RBP7.34□□□□□ -1.23
USF1-204ENST00000472217 H3BUX3 64 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 K7N7A8 449 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 SLC16A6O15403 523 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 WIPF1O43516 503 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 ZNF737O75373 536 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms