RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 S100A13Q99584 98 aa16.43■□□□□ 0.22
CHMP2B-204ENST00000472024 DYNLRB1Q9NP97 96 aa16.43■□□□□ 0.22
CHMP2B-204ENST00000472024 AKIP1Q9NQ31 210 aa16.43■□□□□ 0.22
CHMP2B-204ENST00000472024 A1L4Q6 167 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 CYSRT1A8MQ03 144 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 H7C417 338 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 CDIPTO14735 213 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 EIF4EP06730 217 aaKnown RBP16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 SFTPBP07988 381 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 TNFRSF1AP19438 455 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 PTBP1P26599 531 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 EFNB2P52799 333 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 RPS27AP62979 156 aaKnown RBP16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 RSU1Q15404 277 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 MPPED2Q15777 294 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 SLC22A6Q4U2R8 563 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 SPRNQ5BIV9 151 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 PRAMEF6Q5VXH4 476 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 METAP1DQ6UB28 335 aaPredicted RBP16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 CMTM4Q8IZR5 234 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 ZNF295-AS1Q8N0V1 137 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 MFSD4AQ8N468 514 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 CEP19Q96LK0 163 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 EGLN1Q9GZT9 426 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 LPAR5Q9H1C0 372 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 KCNK15Q9H427 330 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 FN3KRPQ9HA64 309 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 SEBOXQ9HB31 216 aaPredicted RBP16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 GCM1Q9NP62 436 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 RABL2AQ9UBK7 228 aaPredicted RBP16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 ING4Q9UNL4 249 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 RABL2BQ9UNT1 228 aa16.42■□□□□ 0.22
CHMP2B-204ENST00000472024 FOXI3A8MTJ6 420 aaPredicted RBP16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 IFNL4K9M1U5 179 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 RGS5O15539 181 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 RHBDL1O75783 438 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 SCGNO76038 276 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 LHBP01229 141 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 GRPP07492 148 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 GTF2F2P13984 249 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 PMELP40967 661 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 FGF12P61328 243 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 OR10K2Q6IF99 312 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 S100ZQ8WXG8 99 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 Q96M66 194 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 TMEM59Q9BXS4 323 aa16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 CLEC4MQ9H2X3 399 aaPredicted RBP16.41■□□□□ 0.22
CHMP2B-204ENST00000472024 A0A1W2PP11 408 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A10PA6NDY2 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A18PA6NE21 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A16PA6NEW6 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A20PA6NIJ5 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A8PA6NJQ4 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A7PA6NKC0 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A22PA8MWA6 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A12PA8MX19 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A5PA8MXJ8 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A23PA8MXZ1 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 SRRM5B3KS81 715 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 TRAPPC2LH3BP13 241 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 CHRM2P08172 466 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A15PP0C7V4 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A13PP0C7W8 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A14PP0C7W9 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 FAM90A24PP0C7X0 464 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 MGMTP16455 207 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 BCL3P20749 454 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 NPBWR2P48146 333 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 MRPS11P82912 194 aaKnown RBP16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 RAB12Q6IQ22 244 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 CNIH2Q6PI25 160 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 SLAMF9Q96A28 289 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 TSC22D3Q99576 134 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 HMG20AQ9NP66 347 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 RASL12Q9NYN1 266 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 PLEKHA6Q9Y2H5 1048 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 V9GYH0 126 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 CACNA1DQ01668 2161 aa16.4■□□□□ 0.22
CHMP2B-204ENST00000472024 F8VVB4 439 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 F8VWA3 439 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 OVOL3O00110 214 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 RAB27BO00194 218 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 CRTAPO75718 401 aaPredicted RBP16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 PLATP00750 562 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 NR4A2P43354 598 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 ZNF45Q02386 682 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 IL13RA2Q14627 380 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 BAIAP2L2Q6UXY1 529 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 LINC00596Q86U02 117 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 FAM90A1Q86YD7 464 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 OSR2Q8N2R0 312 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 OR10K1Q8NGX5 313 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 S100A16Q96FQ6 103 aaKnown RBP16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 URM1Q9BTM9 101 aaKnown RBP16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 IFT22Q9H7X7 185 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 UBTD1Q9HAC8 227 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 SAP30LQ9HAJ7 183 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 C1orf123Q9NWV4 160 aa16.39■□□□□ 0.21
CHMP2B-204ENST00000472024 A0A0A6YYD4 124 aa16.38■□□□□ 0.21
CHMP2B-204ENST00000472024 METTL21EPA6NDL7 271 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms