RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 YAP1P46937 504 aaKnown RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 IDH2P48735 452 aaKnown RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 POLR2HP52434 150 aaKnown RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 DSCR4P56555 118 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 RPL23AP62750 156 aaKnown RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ARG2P78540 354 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 HOXC5Q00444 222 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 GANABQ14697 944 aaKnown RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 SLC17A1Q14916 467 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 OR1C1Q15619 314 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 RFX4Q33E94 735 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 GLYR1Q49A26 553 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 C2orf83Q53S99 150 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 LPCAT4Q643R3 524 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 TIGD3Q6B0B8 471 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM225Q6GV28 225 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 SLC25A25Q6KCM7 469 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 C5orf46Q6UWT4 87 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM179BQ7Z7N9 219 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 PLCZ1Q86YW0 608 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CADM2Q8N3J6 435 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ZADH2Q8N4Q0 377 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CBR4Q8N4T8 237 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 GATSQ8NAP1 163 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ICA1LQ8NDH6 482 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 MDS2Q8NDY4 140 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 FDCSPQ8NFU4 85 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 OR2M3Q8NG83 312 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 OR4K17Q8NGC6 315 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 OR1J4Q8NGS1 313 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 OR52J3Q8NH60 311 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF563Q8TA94 476 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 SLC7A13Q8TCU3 470 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ACOT11Q8WXI4 607 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 DNAJC9Q8WXX5 260 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ST8SIA1Q92185 356 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 SH3YL1Q96HL8 342 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 RDH12Q96NR8 316 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CIB1Q99828 191 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 FAM173AQ9BQD7 235 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM43Q9BTV4 400 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 SLC19A3Q9BZV2 496 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 FAM192AQ9GZU8 254 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 GABARAPL1Q9H0R8 117 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 DSN1Q9H410 356 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 PROK2Q9HC23 129 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 USE1Q9NZ43 259 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 MED11Q9P086 117 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 PDP1Q9P0J1 537 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ENOPH1Q9UHY7 261 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 BOKQ9UMX3 212 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 KLF13Q9Y2Y9 288 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-202ENST00000471307 ORC6Q9Y5N6 252 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 PTPRQQ9UMZ3 2332 aa3.84□□□□□ -1.79
CCDC39-202ENST00000471307 CHD8Q9HCK8 2581 aa3.84□□□□□ -1.8
CCDC39-202ENST00000471307 PRRC2CQ9Y520 2896 aaKnown RBP3.84□□□□□ -1.8
CCDC39-202ENST00000471307 FRYQ5TBA9 3013 aa3.84□□□□□ -1.8
CCDC39-202ENST00000471307 MPDZO75970 2070 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 IGF2RP11717 2491 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 MAP1BP46821 2468 aaKnown RBP3.83□□□□□ -1.8
CCDC39-202ENST00000471307 MGAQ8IWI9 3026 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 TRAV17A0A0B4J275 112 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 FAM25EA8MYX2 175 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 PPIAL4DF5H284 164 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 PDLIM1O00151 329 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 OR10H3O60404 316 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 NDUFA7O95182 113 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 TXNDC12O95881 172 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 GSTM3P21266 225 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 HSPA13P48723 471 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 DAPP51397 102 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 CTBP2P56545 445 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 PRKCDQ05655 676 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 MEF2DQ14814 521 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 QPRTQ15274 297 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 TOMM34Q15785 309 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-202ENST00000471307 LRRC36Q1X8D7 754 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 GSG1Q2KHT4 349 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 NDUFAF6Q330K2 333 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 CNPY1Q3B7I2 92 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 PRAMEF20Q5VT98 475 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 LIPKQ5VXJ0 399 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 KDM4DQ6B0I6 523 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 OR5M10Q6IEU7 315 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 C1orf94Q6P1W5 598 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 FAHD1Q6P587 224 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 TTC33Q6PID6 262 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-202ENST00000471307 TBPL2Q6SJ96 375 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 MBOAT2Q6ZWT7 520 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-202ENST00000471307 GRINAQ7Z429 371 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 NKAIN4Q8IVV8 208 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 CCDC36Q8IYA8 594 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF491Q8N8L2 437 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 ZFP62Q8NB50 900 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-202ENST00000471307 OR2M7Q8NG81 312 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 OR10G2Q8NGC3 310 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 OR4K5Q8NGD3 323 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 PIGXQ8TBF5 258 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 MAGEE2Q8TD90 523 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms