RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 NANOGNBQ7Z5D8 188 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 LUZP2Q86TE4 346 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ADCK1Q86TW2 530 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 OAFQ86UD1 273 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CNEP1R1Q8N9A8 125 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 OR52E2Q8NGJ4 325 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 OR5J2Q8NH18 312 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 MFSD8Q8NHS3 518 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CNIH3Q8TBE1 160 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 SLC35B4Q969S0 331 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 DDIT4LQ96D03 193 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ERMAPQ96PL5 475 aaPredicted RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 OR2M2Q96R28 347 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 AMELYQ99218 206 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 TTYH2Q9BSA4 534 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 C1QTNF6Q9BXI9 259 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ARMC7Q9H6L4 198 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 AMBNQ9NP70 447 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 NANSQ9NR45 359 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CHCHD3Q9NX63 227 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 MRPL39Q9NYK5 338 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 TVP23BQ9NYZ1 205 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 UBAP1Q9NZ09 502 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 USE1Q9NZ43 259 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF229Q9UJW7 825 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 RNF6Q9Y252 685 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 FLVCR1Q9Y5Y0 555 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CDH10Q9Y6N8 788 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 FBN2P35556 2912 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CADP27708 2225 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 ICE1Q9Y2F5 2266 aa3.13□□□□□ -1.91
COL9A1-206ENST00000470652 GCN1Q92616 2671 aaKnown RBP3.13□□□□□ -1.91
COL9A1-206ENST00000470652 CSMD2Q7Z408 3487 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 CCDC182A6NF36 153 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 H3BSH0 61 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 K7EQG2 157 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 BCKDKO14874 412 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 PHF1O43189 567 aaPredicted RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 TXNL1O43396 289 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SELENOFO60613 162 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 WBP4O75554 376 aaKnown RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 LYZL6O75951 148 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SYNGR4O95473 234 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 IGHV1-2P23083 117 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 GTF2E2P29084 291 aaKnown RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 NAA10P41227 235 aaPredicted RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 CA7P43166 264 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 CRISP1P54107 249 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SLC35A1P78382 337 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 CDK5Q00535 292 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 PUDPQ08623 228 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 CD47Q08722 323 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 NPRL3Q12980 569 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 RIPK1Q13546 671 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 C1DQ13901 141 aaKnown RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SNCBQ16143 134 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 INAQ16352 499 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ZSWIM7Q19AV6 140 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 RFX4Q33E94 735 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 HIKESHIQ53FT3 197 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ARMCX4Q5H9R4 360 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 C12orf73Q69YU5 71 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM225Q6GV28 225 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 LEG1Q6P5S2 330 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 TFAP2EQ6VUC0 442 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 PLEKHG7Q6ZR37 379 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 RASSF6Q6ZTQ3 369 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SSX6Q7RTT6 188 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 AAED1Q7RTV5 226 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 HIPK1Q86Z02 1210 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ENTHD1Q8IYW4 607 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM123Q8N131 208 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 OR6V1Q8N148 313 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SVOPLQ8N434 492 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ST6GALNAC3Q8NDV1 305 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 OR4F15Q8NGB8 312 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 FAM81AQ8TBF8 368 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 TEX47Q8TBZ9 253 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SLC7A6Q92536 515 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 PTP4A1Q93096 173 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 NABP1Q96AH0 204 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 STARD4Q96DR4 205 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ZMYND19Q96E35 227 aaPredicted RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 CNBD2Q96M20 576 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 OXGR1Q96P68 337 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 TBX5Q99593 518 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 GABARAPL3Q9BY60 117 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 POTEKPQ9BYX7 375 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SYT4Q9H2B2 425 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 OR51V1Q9H2C8 321 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ANKRD19PQ9H560 264 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 DCLRE1BQ9H816 532 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 WDR76Q9H967 626 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 RNF122Q9H9V4 155 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 C12orf10Q9HB07 376 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 RPRD1BQ9NQG5 326 aaKnown RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 INIPQ9NRY2 104 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 PAK1IP1Q9NWT1 392 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms