RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SFTPBP07988 381 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 GNAO1P09471 354 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ATF1P18846 271 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 GABRA2P47869 451 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ETV1P50549 477 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 GBX2P52951 348 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-215ENST00000470338 BPIFB3P59826 476 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ARF6P62330 175 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 CNN3Q15417 329 aaKnown RBP11.67□□□□□ -0.54
TOP3B-215ENST00000470338 METTL11BQ5VVY1 283 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 CD177Q8N6Q3 437 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ZNF676Q8N7Q3 588 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ZDHHC22Q8N966 263 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ZNRF1Q8ND25 227 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 BORCS8Q96FH0 119 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-215ENST00000470338 PCGF1Q9BSM1 259 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 MTCH1Q9NZJ7 389 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 DIMT1Q9UNQ2 313 aaKnown RBP11.67□□□□□ -0.54
TOP3B-215ENST00000470338 CAB39Q9Y376 341 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-215ENST00000470338 KPTNQ9Y664 436 aa11.67□□□□□ -0.54
TOP3B-215ENST00000470338 CENPVL3A0A0U1RRI6 287 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 TMEM212A6NML5 194 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 NXPH2O95156 264 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 CCDC159P0C7I6 412 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 ZNF20P17024 532 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 PRKACBP22694 351 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 PRDX2P32119 198 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 RBP2P50120 134 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 ATP1B3P54709 279 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 SLC34A1Q06495 639 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 PDCD1Q15116 288 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 CCDC58Q4VC31 144 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 LAIR2Q6ISS4 152 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 C8orf59Q8N0T1 100 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-215ENST00000470338 SIGLECL1Q8N7X8 197 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 OR13C3Q8NGS6 347 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 OR5AK2Q8NH90 309 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 FBLIM1Q8WUP2 373 aa11.66□□□□□ -0.54
TOP3B-215ENST00000470338 TRBV2A0A0J9YWF9 115 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 F8VVB4 439 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 F8VWA3 439 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 TRIM77I1YAP6 450 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 ALX3O95076 343 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 MT-ND2P03891 347 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 NDUFB7P17568 137 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 AZGP1P25311 298 aaKnown RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 GTF2A1P52655 376 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 GPR157Q5UAW9 335 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 RPL22L1Q6P5R6 122 aaKnown RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 RBMS3Q6XE24 437 aaKnown RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 C1orf122Q6ZSJ8 110 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 ZNF561Q8N587 486 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 KIR3DL3Q8N743 410 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 RPS4Y2Q8TD47 263 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 H1FXQ92522 213 aaKnown RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 TFAP2CQ92754 450 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 GGHQ92820 318 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 SPSB1Q96BD6 273 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 TMEM80Q96HE8 168 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 CEP19Q96LK0 163 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 PDCD1LG2Q9BQ51 273 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 COMMD4Q9H0A8 199 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 VCXQ9H320 206 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 PLCXD1Q9NUJ7 323 aa11.65□□□□□ -0.54
TOP3B-215ENST00000470338 EXOSC1Q9Y3B2 195 aaKnown RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 SOX21Q9Y651 276 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-215ENST00000470338 H0YJX3 145 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 SLC1A7O00341 560 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 KNG1P01042 644 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 PIPP12273 146 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-215ENST00000470338 MTCP1P56278 107 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 OR2G6Q5TZ20 316 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 XAF1Q6GPH4 301 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 METAP1DQ6UB28 335 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-215ENST00000470338 BRD3OSQ6XYD6 125 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 SLC25A26Q70HW3 274 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 MKXQ8IYA7 352 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 PARP16Q8N5Y8 322 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 Q8N7P7 452 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 TMEM185AQ8NFB2 350 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 NRG4Q8WWG1 115 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 C1orf147Q96MC9 270 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-215ENST00000470338 OPALINQ96PE5 141 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 ZCCHC4Q9H5U6 513 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 SEBOXQ9HB31 216 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-215ENST00000470338 BABAM2Q9NXR7 383 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 CNOT2Q9NZN8 540 aaKnown RBP11.64□□□□□ -0.55
TOP3B-215ENST00000470338 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 CLEC2DQ9UHP7 191 aa11.64□□□□□ -0.55
TOP3B-215ENST00000470338 TENM1Q9UKZ4 2725 aa11.63□□□□□ -0.55
TOP3B-215ENST00000470338 TRBV23-1A0A0A0MS06 115 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms