RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 MLNRO43193 412 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 HPGDSO60760 199 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 CTAG2O75638 210 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 PAHP00439 452 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 IGHV3-13P01766 116 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 GRPP07492 148 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 OR4A8P0C604 315 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 GSTT2P0CG29 244 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 GSTT2BP0CG30 244 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 IGFBP3P17936 291 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 KITLGP21583 273 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 MMP15P51511 669 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 RPS16P62249 146 aaKnown RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 UBE2V2Q15819 145 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 CARTPTQ16568 116 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 BAK1Q16611 211 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF718Q3SXZ3 478 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF672Q499Z4 452 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 TMEM42Q69YG0 159 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF544Q6NX49 715 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 KRT74Q7RTS7 529 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 CCDC190Q86UF4 302 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 ZCCHC24Q8N2G6 241 aaKnown RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 SEMA6DQ8NFY4 1073 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 OR5L1Q8NGL2 311 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 SYNPRQ8TBG9 265 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 SUN5Q8TC36 379 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 TSEN15Q8WW01 171 aaKnown RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 HPSE2Q8WWQ2 592 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 AKAP1Q92667 903 aaKnown RBP eCLIP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 MRPL24Q96A35 216 aaKnown RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 KCTD7Q96MP8 289 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 GFI1Q99684 422 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 MMP27Q9H306 513 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF442Q9H7R0 627 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 SP140LQ9H930 580 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 HMG20AQ9NP66 347 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 TAS2R4Q9NYW5 299 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 CISD1Q9NZ45 108 aaKnown RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 KCNN3Q9UGI6 736 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF391Q9UJN7 358 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 PURGQ9UJV8 347 aaKnown RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 POU2F3Q9UKI9 436 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 DHDHQ9UQ10 334 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 NBPF19A0A087WUL8 3843 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 CADP27708 2225 aa4.01□□□□□ -1.77
SF3B1-208ENST00000470268 SPTBN1Q01082 2364 aaKnown RBP4.01□□□□□ -1.77
SF3B1-208ENST00000470268 A0A0G2JK05 382 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 GGT3PA6NGU5 568 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 ZSCAN5BA6NJL1 495 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 DHRS7CA6NNS2 312 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 H0YL77 283 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 GMDSO60547 372 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 GATBO75879 557 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 FSHBP01225 129 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CD8AP01732 235 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SOD3P08294 240 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SELEP16581 610 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF20P17024 532 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SRMP19623 302 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 GALP22466 123 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 TUBG1P23258 451 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CA6P23280 308 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CFL1P23528 166 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 GCH1P30793 250 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SOX6P35712 828 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 DDOSTP39656 456 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 RORCP51449 518 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PTTG1IPP53801 180 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 NHLH2Q02577 135 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 RIPPLY1Q0D2K3 151 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 P2RY14Q15391 338 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 TRAM1Q15629 374 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 TIMM50Q3ZCQ8 353 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SPRNQ5BIV9 151 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CEP78Q5JTW2 689 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 UNQ6126/PRO20091Q6UXV3 157 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 LRRTM1Q86UE6 522 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 LYPD6Q86Y78 171 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SERPINA12Q8IW75 414 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 DNAAF1Q8NEP3 725 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 OR13C9Q8NGT0 318 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 NPRL2Q8WTW4 380 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PIGCQ92535 297 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SPACA5Q96QH8 159 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 NEU1Q99519 415 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CHST5Q9GZS9 411 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 OPA3Q9H6K4 179 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PLEKHA1Q9HB21 404 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 TUBG2Q9NRH3 451 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 GPR173Q9NS66 373 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 DAPK2Q9UIK4 370 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CMAHPQ9Y471 501 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 HRNRQ86YZ3 2850 aaPredicted RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 ANKHD1Q8IWZ3 2542 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 IGKV1-27A0A075B6S5 117 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 IGHV3-64DA0A0J9YX35 117 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF816-ZNF321PA0A0X1KG74 233 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 A0A1B0GWJ7 208 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms