RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SOX14O95416 240 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 HPRT1P00492 218 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 CD8AP01732 235 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 SEMG1P04279 462 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 NBEAP1P0C6P0 100 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ALOX5APP20292 161 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 WARSP23381 471 aaKnown RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 MPIP34949 423 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 IFNGR2P38484 337 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 GLP1RP43220 463 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 GSSP48637 474 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TTPAP49638 278 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TCL1AP56279 114 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 RAB25P57735 213 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 OR12D2P58182 307 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ARG2P78540 354 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ZNF154Q13106 437 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 SHHQ15465 462 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TOMM34Q15785 309 aaPredicted RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 NRF1Q16656 503 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 HIST3H3Q16695 136 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 C1orf146Q5VVC0 180 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TMEM42Q69YG0 159 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 FAM19A1Q7Z5A9 133 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 CLVS1Q8IUQ0 354 aaPredicted RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 NRMQ8IXM6 262 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 SVOPLQ8N434 492 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 SPICQ8N5J4 248 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ZNF557Q8N988 423 aaPredicted RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 OR51Q1Q8NH59 317 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 STOML3Q8TAV4 291 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ZMYND19Q96E35 227 aaPredicted RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ZHX1-C8orf76Q96EF9 292 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TMEM80Q96HE8 168 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 SFRP2Q96HF1 295 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ZNF488Q96MN9 340 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TSC22D3Q99576 134 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 HOPXQ9BPY8 73 aaPredicted RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 MRPL45Q9BRJ2 306 aaKnown RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TMEM109Q9BVC6 243 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 TMED9Q9BVK6 235 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 REEP1Q9H902 201 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 COMMD9Q9P000 198 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 MMP17Q9ULZ9 603 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 NDRG2Q9UN36 371 aaKnown RBP3.01□□□□□ -1.93
COL11A1-208ENST00000470170 L3MBTL1Q9Y468 752 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 KLF12Q9Y4X4 402 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 OR51B2Q9Y5P1 312 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 ARHGAP21Q5T5U3 1957 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 PBRM1Q86U86 1689 aa3.01□□□□□ -1.93
COL11A1-208ENST00000470170 MSH6P52701 1360 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 FANCIQ9NVI1 1328 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 OR11H12B2RN74 326 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 F5H5K5 113 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 TNFRSF11BO00300 401 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 NME4O00746 187 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 TAAR5O14804 337 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 EIF3GO75821 320 aaKnown RBP eCLIP3□□□□□ -1.93
COL11A1-208ENST00000470170 LALBAP00709 142 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 CD74P04233 296 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 PCCAP05165 728 aaPredicted RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 KLK3P07288 261 aaPredicted RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 CD55P08174 381 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 LINC00614P0C842 121 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 SCGB1A1P11684 91 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 ICAM2P13598 275 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 F2RP25116 425 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 HTR1EP28566 365 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 PTGDSP41222 190 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 KIR2DS4P43632 304 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 RPL5P46777 297 aaKnown RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 RORCP51449 518 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 CRYBA4P53673 196 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 SUB1P53999 127 aaKnown RBP eCLIP3□□□□□ -1.93
COL11A1-208ENST00000470170 DLX1P56177 255 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 RAB38P57729 211 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 PPP1CBP62140 327 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 RPS14P62263 151 aaKnown RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 BTN3A2P78410 334 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 SLC10A7Q0GE19 358 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 EDDM3AQ14507 147 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 GINS1Q14691 196 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 CEACAM21Q3KPI0 293 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 PARP15Q460N3 678 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 VAX1Q5SQQ9 334 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 FAM120AOSQ5T036 256 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 CYHR1Q6ZMK1 362 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 ZNF589Q86UQ0 364 aaPredicted RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 SLC30A8Q8IWU4 369 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 OR6V1Q8N148 313 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 PNKDQ8N490 385 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 ARIH2OSQ8N7S6 290 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 HSD17B11Q8NBQ5 300 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 OR11H1Q8NG94 326 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 OR52E4Q8NGH9 312 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 OR2A1Q8NGT9 310 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 OR11H2Q8NH07 326 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 RNASE11Q8TAA1 199 aaKnown RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 DCUN1D4Q92564 292 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 FGGYQ96C11 551 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms