RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 CHRDL1Q9BU40 450 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 FKBP11Q9NYL4 201 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 IGHV3OR16-10A0A075B7F0 116 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 CD3DP04234 171 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 VDAC1P21796 283 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 TMUB2Q71RG4 321 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 CARFQ8N187 725 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 D2HGDHQ8N465 521 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 TSPAN32Q96QS1 320 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 MSL2Q9HCI7 577 aa6.26□□□□□ -1.41
CD46-212ENST00000469535 TNRC6CQ9HCJ0 1690 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 TMEM129A0AVI4 362 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 MDH2P40926 338 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 RPL34P49207 117 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 SELENOPP49908 381 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 LOXL3P58215 753 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 RAC3P60763 192 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 CCL8P80075 99 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 LY6EQ16553 131 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 SP6Q3SY56 376 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 ATP1A1-AS1Q5TC04 95 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 GNPNAT1Q96EK6 184 aaPredicted RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 RBFOX1Q9NWB1 397 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 DNAJB12Q9NXW2 375 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 CACFD1Q9UGQ2 172 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 ZNF727A8MUV8 499 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 NKX2-2O95096 273 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 MRPS11P82912 194 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 GUCA2AQ02747 115 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 HLXQ14774 488 aaPredicted RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 SLC25A40Q8TBP6 338 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 PTP4A1Q93096 173 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 RPL12P30050 165 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 C19orf57Q0VDD7 668 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 ADAMTS17Q8TE56 1095 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 GAR1Q9NY12 217 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 IGHV3-21A0A0B4J1V1 117 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 PLPP3O14495 311 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 CDIPTO14735 213 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 SPINT1O43278 529 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 CST7O76096 145 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 GYPAP02724 150 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 REG1BP48304 166 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 OXA1LQ15070 435 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 KRTCAP3Q53RY4 240 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 ARHGDIGQ99819 225 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 WDR61Q9GZS3 305 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 SHROOM3Q8TF72 1996 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 TTC3P53804 2025 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 E5RGE8 158 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 HAND1O96004 215 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 S100A11P31949 105 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 ERVFC1-1P60608 527 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 SLC24A4Q8NFF2 622 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 VSTM2LQ96N03 204 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 ZNF416Q9BWM5 594 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 RYDENQ9NUL5 291 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 CISD1Q9NZ45 108 aaKnown RBP6.25□□□□□ -1.41
CD46-212ENST00000469535 NSG2Q9Y328 171 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 LANCL1O43813 399 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 MPGP29372 298 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 SLC35B1P78383 322 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 PAX5Q02548 391 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 SPRED3Q2MJR0 410 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 PDZD11Q5EBL8 140 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 SYS1Q8N2H4 156 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 FAM26EQ8N5C1 309 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 PERPQ96FX8 193 aa6.25□□□□□ -1.41
CD46-212ENST00000469535 PTPRZ1P23471 2315 aaPredicted RBP6.24□□□□□ -1.41
CD46-212ENST00000469535 A0A0B4J2E0 115 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 A0A1B0GX12 115 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 KLRB1Q12918 225 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 FAM219BQ5XKK7 198 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 C6orf201Q7Z4U5 140 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 CELF2-AS1Q8N7Q2 184 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 FADS6Q8N9I5 356 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 RXFP4Q8TDU9 374 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 GMPPAQ96IJ6 420 aaPredicted RBP6.24□□□□□ -1.41
CD46-212ENST00000469535 DCTN5Q9BTE1 182 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 TMEM231Q9H6L2 316 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 PARP11Q9NR21 331 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 DCAF16Q9NXF7 216 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 ZAR1LA6NP61 321 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 H7BYZ3 331 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 BCL3P20749 454 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 KCNJ3P48549 501 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 RRN3P1Q2M238 152 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 C1QL3Q5VWW1 255 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 OR4A4PQ8NGN8 299 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 NEIL1Q96FI4 390 aaPredicted RBP6.24□□□□□ -1.41
CD46-212ENST00000469535 ARHGAP5-AS1Q96IT6 56 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 SLC25A32Q9H2D1 315 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 SIRT5Q9NXA8 310 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 SLC25A10Q9UBX3 287 aaPredicted RBP6.24□□□□□ -1.41
CD46-212ENST00000469535 FLVCR2Q9UPI3 526 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 LOC102723971A0A1B0GUV8 181 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 IFITM5A6NNB3 132 aa6.24□□□□□ -1.41
CD46-212ENST00000469535 ZNHIT1O43257 154 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms