RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 DLGAP1O14490 977 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 FBXO24O75426 580 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 RAB13P51153 203 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 HABP2Q14520 560 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-203ENST00000467847 BCL2L15Q5TBC7 163 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 TMEM42Q69YG0 159 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 Q6ZPA2 131 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 REC114Q7Z4M0 266 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 FOXRED1Q96CU9 486 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-203ENST00000467847 MOB1AQ9H8S9 216 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 HES4Q9HCC6 221 aa13.96□□□□□ -0.17
TRIM56-203ENST00000467847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRIM56-203ENST00000467847 A6NIN4 97 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 C17orf98A8MV24 154 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 SRSF10O75494 262 aaKnown RBP13.95□□□□□ -0.18
TRIM56-203ENST00000467847 ARG1P05089 322 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 MPZP25189 248 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 CRISP1P54107 249 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 DLX6P56179 175 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 ZNF322Q6U7Q0 402 aaPredicted RBP13.95□□□□□ -0.18
TRIM56-203ENST00000467847 TMEM219Q86XT9 240 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 Q8N2B8 174 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 ASCC1Q8N9N2 400 aaKnown RBP13.95□□□□□ -0.18
TRIM56-203ENST00000467847 OR4S1Q8NGB4 309 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 OR13D1Q8NGV5 346 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 RPS4Y2Q8TD47 263 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 APOL4Q9BPW4 351 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 CDCA4Q9BXL8 241 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 PAPOLBQ9NRJ5 636 aaKnown RBP13.95□□□□□ -0.18
TRIM56-203ENST00000467847 ABCB10Q9NRK6 738 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 SERTAD4Q9NUC0 356 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 DNAJB9Q9UBS3 223 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
TRIM56-203ENST00000467847 V9GYS6 101 aa13.95□□□□□ -0.18
TRIM56-203ENST00000467847 MEX3AA1L020 520 aaKnown RBP13.94□□□□□ -0.18
TRIM56-203ENST00000467847 K7N7A8 449 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 MAGEB4O15481 346 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-203ENST00000467847 XPNPEP2O43895 674 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 PRKYO43930 277 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 CD28P10747 220 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 CXCR4P61073 352 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 ACTR3P61158 418 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 CBX1P83916 185 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 COL10A1Q03692 680 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 EMX1Q04741 257 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-203ENST00000467847 CNN3Q15417 329 aaKnown RBP13.94□□□□□ -0.18
TRIM56-203ENST00000467847 SSX2Q16385 188 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 CCBE1Q6UXH8 406 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-203ENST00000467847 PLEKHG7Q6ZR37 379 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 SPATA24Q86W54 205 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 ANGPTL5Q86XS5 388 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 ELMOD2Q8IZ81 293 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 DNAJC9Q8WXX5 260 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 MALSU1Q96EH3 234 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 OR52A1Q9UKL2 312 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 SLC22A13Q9Y226 551 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 R4GMQ9 66 aa13.94□□□□□ -0.18
TRIM56-203ENST00000467847 A0A1B0GTI1 187 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 A6NDX4 124 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 ODF3BA8MYP8 253 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 FKBP6O75344 327 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 PEX14O75381 377 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 ZNF728P0DKX0 622 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 EDDM3BP56851 147 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 ERVK11-1P61568 191 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 IL24Q13007 206 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 FLOT2Q14254 428 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 OXLD1Q5BKU9 147 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 MEPCEQ7L2J0 689 aaKnown RBP13.93□□□□□ -0.18
TRIM56-203ENST00000467847 GDPD3Q7L5L3 318 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 BCDIN3DQ7Z5W3 292 aaKnown RBP13.93□□□□□ -0.18
TRIM56-203ENST00000467847 NDUFA11Q86Y39 141 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 SLC35F2Q8IXU6 374 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 CCDC197Q8NCU1 140 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 OR4F17Q8NGA8 305 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 OR14K1Q8NGZ2 314 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 TRMT10AQ8TBZ6 339 aaKnown RBP13.93□□□□□ -0.18
TRIM56-203ENST00000467847 R3HDM4Q96D70 268 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 OR4F4Q96R69 305 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 MNTQ99583 582 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 PRRG3Q9BZD7 231 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 PKIBQ9C010 78 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 PRSS22Q9GZN4 317 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 MMP28Q9H239 520 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 PITPNC1Q9UKF7 332 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 SNX5Q9Y5X3 404 aa13.93□□□□□ -0.18
TRIM56-203ENST00000467847 KMT2CQ8NEZ4 4911 aaKnown RBP13.92□□□□□ -0.18
TRIM56-203ENST00000467847 FAM230AA0A1W2PPH8 454 aa13.92□□□□□ -0.18
TRIM56-203ENST00000467847 DHRS7CA6NNS2 312 aa13.92□□□□□ -0.18
TRIM56-203ENST00000467847 M0R129 80 aa13.92□□□□□ -0.18
TRIM56-203ENST00000467847 RBP4P02753 201 aa13.92□□□□□ -0.18
TRIM56-203ENST00000467847 CHRM2P08172 466 aa13.92□□□□□ -0.18
TRIM56-203ENST00000467847 DYNC1I2Q13409 638 aaKnown RBP13.92□□□□□ -0.18
TRIM56-203ENST00000467847 PTGES3Q15185 160 aaKnown RBP13.92□□□□□ -0.18
TRIM56-203ENST00000467847 ARSJQ5FYB0 599 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-203ENST00000467847 ZNF626Q68DY1 528 aa13.92□□□□□ -0.18
TRIM56-203ENST00000467847 OR11H6Q8NGC7 330 aa13.92□□□□□ -0.18
TRIM56-203ENST00000467847 MRAPQ8TCY5 172 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms