RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TOMM40LQ969M1 308 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 FLYWCH2Q96CP2 140 aaKnown RBP9.55□□□□□ -0.88
UBR4-210ENST00000466969 REEP6Q96HR9 211 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 HIST1H2AAQ96QV6 131 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 NEURL2Q9BR09 285 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 TOLLIPQ9H0E2 274 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 NSRP1Q9H0G5 558 aaKnown RBP9.55□□□□□ -0.88
UBR4-210ENST00000466969 PLEKHA1Q9HB21 404 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 CYB5R1Q9UHQ9 305 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 DSCAML1Q8TD84 2053 aa9.55□□□□□ -0.88
UBR4-210ENST00000466969 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 FAM172BPA6NC97 362 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 FAM183AA6NL82 134 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 M0R2N4 97 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 IGKV1D-33P01593 117 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 IGKV1-33P01594 117 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 OTX1P32242 354 aaPredicted RBP9.54□□□□□ -0.88
UBR4-210ENST00000466969 GPR4P46093 362 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 RAB9AP51151 201 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 GPM6AP51674 278 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 PRKXP51817 358 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 PRRX1P54821 245 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 EIF2B1Q14232 305 aaKnown RBP9.54□□□□□ -0.88
UBR4-210ENST00000466969 KRT71Q3SY84 523 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 BAIAP2L2Q6UXY1 529 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 MSANTD1Q6ZTZ1 278 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 TCF23Q7RTU1 214 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 Q8N402 240 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 FMO2Q99518 471 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 NDEL1Q9GZM8 345 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 TMEM38AQ9H6F2 299 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 ETAA1Q9NY74 926 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 ZIM2Q9NZV7 527 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 FBXO7Q9Y3I1 522 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 LINC00312Q9Y6C7 94 aa9.54□□□□□ -0.88
UBR4-210ENST00000466969 LY6LH3BQJ8 138 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 J3QL48 77 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 MMP23AO75900 390 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 ABHD2P08910 425 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 TROVE2P10155 538 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBR4-210ENST00000466969 CFL1P23528 166 aaKnown RBP9.53□□□□□ -0.88
UBR4-210ENST00000466969 BMI1P35226 326 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 GSK3AP49840 483 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 TRIM25Q14258 630 aaKnown RBP9.53□□□□□ -0.88
UBR4-210ENST00000466969 EDDM3AQ14507 147 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 FAM122BQ7Z309 247 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 WFDC3Q8IUB2 231 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 TIGD4Q8IY51 512 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 PIGCQ92535 297 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 WDR89Q96FK6 387 aaPredicted RBP9.53□□□□□ -0.88
UBR4-210ENST00000466969 TSSK2Q96PF2 358 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 RASL11BQ9BPW5 248 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 COPS4Q9BT78 406 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 SLC2A8Q9NY64 477 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 RIMS3Q9UJD0 308 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 COMMD3-BMI1R4GMX3 469 aa9.53□□□□□ -0.88
UBR4-210ENST00000466969 hCG_38984A0A1B0GV85 526 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 M0QX08 132 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 ARPC1BO15143 372 aaKnown RBP9.52□□□□□ -0.89
UBR4-210ENST00000466969 MPZL2O60487 215 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 HLA-DQA2P01906 255 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 HSPB1P04792 205 aaKnown RBP9.52□□□□□ -0.89
UBR4-210ENST00000466969 LGALS1P09382 135 aaKnown RBP9.52□□□□□ -0.89
UBR4-210ENST00000466969 KRT4P19013 534 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 NOS3P29474 1203 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 TAF13Q15543 124 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 GFOD2Q3B7J2 385 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 SOHLH1Q5JUK2 328 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 OGFOD2Q6N063 350 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 TRAPPC6BQ86SZ2 158 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 ADCK1Q86TW2 530 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 HPSE2Q8WWQ2 592 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 SGK3Q96BR1 496 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 FGF23Q9GZV9 251 aaPredicted RBP9.52□□□□□ -0.89
UBR4-210ENST00000466969 OR51I2Q9H344 312 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 TPSG1Q9NRR2 321 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 SLC22A13Q9Y226 551 aa9.52□□□□□ -0.89
UBR4-210ENST00000466969 EFCAB9A8MZ26 197 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 OR11H12B2RN74 326 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 SOCS2O14508 198 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 NXPH2O95156 264 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 ANXA2P07355 339 aaKnown RBP9.51□□□□□ -0.89
UBR4-210ENST00000466969 GNG3P63215 75 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 FHL1Q13642 323 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 PRAMEF5Q5TYX0 476 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 HAGHLQ6PII5 290 aaPredicted RBP9.51□□□□□ -0.89
UBR4-210ENST00000466969 C4orf33Q8N1A6 199 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 LINC00471Q8N535 108 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 POC1AQ8NBT0 407 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 OR13C2Q8NGS9 318 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 SLC26A7Q8TE54 656 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 AQP3Q92482 292 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 ZNF488Q96MN9 340 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 KCNJ15Q99712 375 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 ZNF286AQ9HBT8 521 aa9.51□□□□□ -0.89
UBR4-210ENST00000466969 SRA1Q9HD15 236 aaKnown RBP9.51□□□□□ -0.89
UBR4-210ENST00000466969 ZNF732B4DXR9 585 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 DCTN6O00399 190 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 DLGAP1O14490 977 aa9.5□□□□□ -0.89
UBR4-210ENST00000466969 PPIBP23284 216 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 220.1 ms