RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CFL2Q9Y281 166 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 ACOT9Q9Y305 439 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 NPHP4O75161 1426 aaPredicted RBP1.74□□□□□ -2.13
SMC4-205ENST00000465563 TENM1Q9UKZ4 2725 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 H7C2Y5 167 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 K7EN84 100 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 DEDDO75618 318 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 CNMDO75829 334 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 CSTAP01040 98 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 INAFM2P0DMQ5 153 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 MPIP34949 423 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 CARD18P57730 90 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 FLI1Q01543 452 aaPredicted RBP1.74□□□□□ -2.13
SMC4-205ENST00000465563 IFFO1Q0D2I5 559 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 FAM19A1Q7Z5A9 133 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 PRNTQ86SH4 94 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 FAM58AQ8N1B3 248 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 CA13Q8N1Q1 262 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 ZFP62Q8NB50 900 aaPredicted RBP1.74□□□□□ -2.13
SMC4-205ENST00000465563 ZNF555Q8NEP9 628 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 OR4K2Q8NGD2 314 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 CIDECQ96AQ7 238 aaPredicted RBP1.74□□□□□ -2.13
SMC4-205ENST00000465563 ZBED3Q96IU2 234 aaPredicted RBP1.74□□□□□ -2.13
SMC4-205ENST00000465563 C1orf50Q9BV19 199 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 ANGPTL4Q9BY76 406 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 TBL1XR1Q9BZK7 514 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 TM6SF2Q9BZW4 377 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 RDH14Q9HBH5 336 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 FAM60AQ9NP50 221 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 IFNKQ9P0W0 207 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 RAB22AQ9UL26 194 aa1.74□□□□□ -2.13
SMC4-205ENST00000465563 A0A0G2JMP0 313 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 A0A0X1KG70 313 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 FAM240AA0A1B0GVK7 77 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 IZUMO1RA6ND01 250 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 ZNF593O00488 134 aaPredicted RBP1.73□□□□□ -2.13
SMC4-205ENST00000465563 RFXANKO14593 260 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 PRMT5O14744 637 aaPredicted RBP1.73□□□□□ -2.13
SMC4-205ENST00000465563 IGLV7-43P04211 117 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 OR4Q2P0C623 313 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 OR5AC1P0C628 307 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 LIPCP11150 499 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 HTR2CP28335 458 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 ADIGQ0VDE8 80 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 TRDNQ13061 729 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 BAMBIQ13145 260 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 MAPRE2Q15555 327 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 HSP90AA4PQ58FG1 418 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 CLLU1OSQ5K130 101 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 KCTD16Q68DU8 428 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 PID1Q7Z2X4 250 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 DAZ4Q86SG3 579 aaKnown RBP1.73□□□□□ -2.13
SMC4-205ENST00000465563 GAPTQ8N292 157 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 SYS1Q8N2H4 156 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 ASCC1Q8N9N2 400 aaKnown RBP1.73□□□□□ -2.13
SMC4-205ENST00000465563 NDNFQ8TB73 568 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 NT5CQ8TCD5 201 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 ORAOV1Q8WV07 137 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 ING5Q8WYH8 240 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 RNF170Q96K19 258 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 TMED9Q9BVK6 235 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 SHCBP1LQ9BZQ2 653 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 COA1Q9GZY4 146 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 LZTFL1Q9NQ48 299 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 DAZ1Q9NQZ3 744 aaKnown RBP1.73□□□□□ -2.13
SMC4-205ENST00000465563 KLF13Q9Y2Y9 288 aaPredicted RBP1.73□□□□□ -2.13
SMC4-205ENST00000465563 ORC6Q9Y5N6 252 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 ENPP4Q9Y6X5 453 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 V9GYY9 64 aa1.73□□□□□ -2.13
SMC4-205ENST00000465563 TRAV8-7A0A075B6U6 113 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 GOLGA6L4A6NEF3 574 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 TVP23AA6NH52 213 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 SEC14L6B5MCN3 397 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 HLA-GP17693 338 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 BGNP21810 368 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 OR12D2P58182 307 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 RPS11P62280 158 aaKnown RBP eCLIP1.72□□□□□ -2.13
SMC4-205ENST00000465563 XIAPP98170 497 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 ATP5G2Q06055 141 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 ZNF235Q14590 738 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 STK38Q15208 465 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 FAM131AQ6UXB0 335 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 CLEC18BQ6UXF7 455 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 CLEC19AQ6UXS0 136 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 FA2HQ7L5A8 372 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 PDPNQ86YL7 162 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 LRRC8AQ8IWT6 810 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 ZNF75CPQ92670 426 aaPredicted RBP1.72□□□□□ -2.13
SMC4-205ENST00000465563 DERL3Q96Q80 235 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 SYT4Q9H2B2 425 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 PRORYQ9H606 182 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 ASB7Q9H672 318 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 C6orf50Q9HD87 102 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 STX18Q9P2W9 335 aaKnown RBP1.72□□□□□ -2.13
SMC4-205ENST00000465563 HMGXB4Q9UGU5 601 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 PRO0628Q9UI54 55 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 FLVCR2Q9UPI3 526 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 AP3M1Q9Y2T2 418 aa1.72□□□□□ -2.13
SMC4-205ENST00000465563 SLC5A10A0PJK1 596 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 J3QKU1 62 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms