RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ACP7Q6ZNF0 438 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 PARP16Q8N5Y8 322 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 CD177Q8N6Q3 437 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 OR5D14Q8NGL3 314 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 ANGPTL6Q8NI99 470 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 ST8SIA4Q92187 359 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 OPALINQ96PE5 141 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 GAFA1Q96PS6 74 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 C7orf69Q9H7B7 122 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 TMEM160Q9NX00 188 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 OR5V1Q9UGF6 321 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 LRCH1Q9Y2L9 728 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 ANK3Q12955 4377 aaKnown RBP9.68□□□□□ -0.86
CUX1-207ENST00000465461 IGKV1-12A0A0C4DH73 117 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 A0A0G2JMP0 313 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 TRBV5-5A0A0J9YX44 114 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 A0A0X1KG70 313 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 RFPL4AA6NLU0 287 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 RFPL4AL1F8VTS6 287 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 NDUFA2O43678 99 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 SULT1B1O43704 296 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 NXPH2O95156 264 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 IGKV1D-12P01611 117 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 HCKP08631 526 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 HSMCR30P0CW71 290 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 BCL3P20749 454 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 PRKACBP22694 351 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 EEF1B2P24534 225 aaKnown RBP9.68□□□□□ -0.86
CUX1-207ENST00000465461 MPZP25189 248 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 SNU13P55769 128 aaKnown RBP9.68□□□□□ -0.86
CUX1-207ENST00000465461 PAX2Q02962 417 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 IL24Q13007 206 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 SPHARQ15513 63 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 DGUOKQ16854 277 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 RNLSQ5VYX0 342 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 LHFPL2Q6ZUX7 228 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 SATL1Q86VE3 508 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 PRIMA1Q86XR5 153 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 ZNRF1Q8ND25 227 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 DNAAF1Q8NEP3 725 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 OR4M2Q8NGB6 313 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 TMEM106AQ96A25 262 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 OR14A2Q96R54 314 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 NRIP2Q9BQI9 281 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 PKIBQ9C010 78 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 ELL3Q9HB65 397 aaPredicted RBP9.68□□□□□ -0.86
CUX1-207ENST00000465461 IL36RNQ9UBH0 155 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 OR14J1Q9UGF5 321 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 OPN4Q9UHM6 478 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 ZNF222Q9UK12 451 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 POLDIP2Q9Y2S7 368 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 INSIG2Q9Y5U4 225 aa9.68□□□□□ -0.86
CUX1-207ENST00000465461 IGHV2-70DA0A0C4DH43 119 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 MAGEA13PA6NCF6 341 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 NOS1APO75052 506 aaPredicted RBP9.67□□□□□ -0.86
CUX1-207ENST00000465461 RAB3AP20336 220 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 SRP14P37108 136 aaKnown RBP9.67□□□□□ -0.86
CUX1-207ENST00000465461 TAS2R43P59537 309 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 ERVK11-1P61568 191 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 PDZK1IP1Q13113 114 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 ZNF788Q6ZQV5 615 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 BTN2A1Q7KYR7 527 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 PRSS48Q7RTY5 328 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 OR52N4Q8NGI2 321 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 RAB40AQ8WXH6 277 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 SPSB1Q96BD6 273 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 C12orf43Q96C57 262 aaKnown RBP9.67□□□□□ -0.86
CUX1-207ENST00000465461 CEP19Q96LK0 163 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 NUDT16L1Q9BRJ7 211 aaKnown RBP9.67□□□□□ -0.86
CUX1-207ENST00000465461 TMED9Q9BVK6 235 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 Q9H521 79 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 NEK6Q9HC98 313 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 HES4Q9HCC6 221 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 RBFOX1Q9NWB1 397 aaKnown RBP9.67□□□□□ -0.86
CUX1-207ENST00000465461 RASL12Q9NYN1 266 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 KAAG1Q9UBP8 84 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 CDC42EP3Q9UKI2 254 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 POLR3KQ9Y2Y1 108 aaPredicted RBP9.67□□□□□ -0.86
CUX1-207ENST00000465461 MAB21L2Q9Y586 359 aa9.67□□□□□ -0.86
CUX1-207ENST00000465461 TRAV8-7A0A075B6U6 113 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 NKX6-3A6NJ46 265 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 PIN1P1O15428 100 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 NDUFB3O43676 98 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 CD2P06729 351 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 ACAA1P09110 424 aaPredicted RBP9.66□□□□□ -0.86
CUX1-207ENST00000465461 TMEM225BP0DP42 221 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 SRD5A1P18405 259 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 DUSP1P28562 367 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 PRDX2P32119 198 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 ZP1P60852 638 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
CUX1-207ENST00000465461 ACSM1Q08AH1 577 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 KISS1Q15726 138 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 SMIM21Q3B7S5 101 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 Q499Y3 187 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 ATPAF1Q5TC12 328 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms