RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 C1QTNF12Q5T7M4 302 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 RSBN1Q5VWQ0 802 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-215ENST00000465457 OLFML2AQ68BL7 652 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 TMEM42Q69YG0 159 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 LHFPL2Q6ZUX7 228 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 AKAP14Q86UN6 197 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 ANGPTL5Q86XS5 388 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF101Q8IZC7 436 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 C17orf78Q8N4C9 275 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 DTX3Q8N9I9 347 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
HDAC6-215ENST00000465457 OR5L1Q8NGL2 311 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 OR52I2Q8NH67 350 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 FBXW5Q969U6 566 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 C1orf159Q96HA4 380 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 NEDD4LQ96PU5 975 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 S100A13Q99584 98 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 NEURL2Q9BR09 285 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 MARVELD1Q9BSK0 173 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 URM1Q9BTM9 101 aaKnown RBP11.83□□□□□ -0.52
HDAC6-215ENST00000465457 OBP2BQ9NPH6 170 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 MTFP1Q9UDX5 166 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 NUBP2Q9Y5Y2 271 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 IGKV1-9A0A0C4DH69 117 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 CD8AP01732 235 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 COX5AP20674 150 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 UBE2NP61088 152 aaKnown RBP11.82□□□□□ -0.52
HDAC6-215ENST00000465457 PLA1AQ53H76 456 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 C9orf135Q5VTT2 229 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 GLIPR1L1Q6UWM5 242 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 CELF2-AS1Q8N7Q2 184 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 CSNK2A3Q8NEV1 391 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 STEAP2Q8NFT2 490 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 POM121L2Q96KW2 1035 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 SOX7Q9BT81 388 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 SHARPINQ9H0F6 387 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 AUNIPQ9H7T9 357 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 PCDHB16Q9NRJ7 776 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 ETAA1Q9NY74 926 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 B3GNT2Q9NY97 397 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 NLKQ9UBE8 527 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 SLC7A11Q9UPY5 501 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 RNF115Q9Y4L5 304 aa11.82□□□□□ -0.52
HDAC6-215ENST00000465457 MEIOCA2RUB1 952 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 C5orf49A4QMS7 147 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 ICMTO60725 284 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF780AO75290 641 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-215ENST00000465457 DHFRP00374 187 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 NAT2P11245 290 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 SRD5A1P18405 259 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 HLA-DMAP28067 261 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 PTGFRP43088 359 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 FAM3AP98173 230 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 P2RY6Q15077 328 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 TSC22D1Q15714 1073 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 UBE2V2Q15819 145 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 TBC1D28Q2M2D7 210 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 ADAM5Q6NVV9 412 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 UNQ6126/PRO20091Q6UXV3 157 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 MRPL21Q7Z2W9 205 aaKnown RBP11.81□□□□□ -0.52
HDAC6-215ENST00000465457 OR56B1Q8NGI3 324 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 TMEM59Q9BXS4 323 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 CHODLQ9H9P2 273 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 PLSCR4Q9NRQ2 329 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 TMEM160Q9NX00 188 aa11.81□□□□□ -0.52
HDAC6-215ENST00000465457 LOC100509620A0A075B734 347 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 C5orf63A6NC05 138 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 INMT-MINDY4F8WBC2 141 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 CDC14BO60729 498 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 KDM4BO94953 1096 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 NRASP01111 189 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 GSTP1P09211 210 aaKnown RBP11.8□□□□□ -0.52
HDAC6-215ENST00000465457 IGHV4-31P0DP07 118 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 ACKR3P25106 362 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 BTCP35070 178 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 OR3A4PP47883 348 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 RBP2P50120 134 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 FUT6P51993 359 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF92Q03936 586 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 PLA2G7Q13093 441 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 UNC119Q13432 240 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 RNASE12Q5GAN4 147 aaKnown RBP11.8□□□□□ -0.52
HDAC6-215ENST00000465457 SEZ6L2Q6UXD5 910 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 GABRG1Q8N1C3 465 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 OR2AE1Q8NHA4 323 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 GPX8Q8TED1 209 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 TNFAIP8L1Q8WVP5 186 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 BORCS8Q96FH0 119 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 TRAF4Q9BUZ4 470 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-215ENST00000465457 CACNG6Q9BXT2 260 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 MMP28Q9H239 520 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 ESRP2Q9H6T0 727 aaKnown RBP11.8□□□□□ -0.52
HDAC6-215ENST00000465457 PKD1L1Q8TDX9 2849 aa11.8□□□□□ -0.52
HDAC6-215ENST00000465457 HMX3A6NHT5 357 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 GMDSO60547 372 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 CST4P01036 141 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 TCRBP04435 133 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 MELTFP08582 738 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 PPP3CBP16298 524 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms