RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 PIFOQ8TCI5 191 aa16.94■□□□□ 0.3
CSPG5-204ENST00000465441 PRRG3Q9BZD7 231 aa16.94■□□□□ 0.3
CSPG5-204ENST00000465441 HES4Q9HCC6 221 aa16.94■□□□□ 0.3
CSPG5-204ENST00000465441 CLN6Q9NWW5 311 aa16.94■□□□□ 0.3
CSPG5-204ENST00000465441 ZAR1LA6NP61 321 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 COX7A1P24310 79 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 MPZP25189 248 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 BMXP51813 675 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 EFNB2P52799 333 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 ZNF273Q14593 569 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 HERPUD1Q15011 391 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 C2orf68Q2NKX9 166 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 C12orf73Q69YU5 71 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 HIST2H2BDQ6DRA6 164 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 BCAS4Q8TDM0 211 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 IL4I1Q96RQ9 567 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 KRT84Q9NSB2 600 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 USE1Q9NZ43 259 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 FOXJ3Q9UPW0 622 aa16.93■□□□□ 0.3
CSPG5-204ENST00000465441 hCG_1809904A0A1W2PP81 198 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 A0A1W2PPE2 198 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 A0A1W2PR64 198 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 A0A1W2PRV1 198 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 MEGF11A6BM72 1044 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 RPP14O95059 124 aaKnown RBP16.92■□□□□ 0.3
CSPG5-204ENST00000465441 LGALS4P56470 323 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 ERVK11-1P61568 191 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 Q6ZTK2 550 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 SSX6Q7RTT6 188 aa16.92■□□□□ 0.3
CSPG5-204ENST00000465441 CADM1Q9BY67 442 aaKnown RBP16.92■□□□□ 0.3
CSPG5-204ENST00000465441 DHRS7CA6NNS2 312 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 G3V2T6 193 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 K7N7A8 449 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 ODF4Q2M2E3 257 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 KDM4DQ6B0I6 523 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 ZNF782Q6ZMW2 699 aaPredicted RBP16.91■□□□□ 0.3
CSPG5-204ENST00000465441 LHFPL4Q7Z7J7 247 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 YIPF7Q8N8F6 280 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 TRMT10AQ8TBZ6 339 aaKnown RBP16.91■□□□□ 0.3
CSPG5-204ENST00000465441 TBX5Q99593 518 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 PKIBQ9C010 78 aa16.91■□□□□ 0.3
CSPG5-204ENST00000465441 TET2Q6N021 2002 aaPredicted RBP16.91■□□□□ 0.3
CSPG5-204ENST00000465441 PRKDCP78527 4128 aaKnown RBP16.9■□□□□ 0.3
CSPG5-204ENST00000465441 FAM230AA0A1W2PPH8 454 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 FAM90A8PA6NJQ4 464 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 C17orf98A8MV24 154 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 H3BSH0 61 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 PIPP12273 146 aaPredicted RBP16.9■□□□□ 0.3
CSPG5-204ENST00000465441 CCL1P22362 96 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 DLX6P56179 175 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 COL10A1Q03692 680 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 IL24Q13007 206 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 UBE2V2Q15819 145 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 ATP6AP1Q15904 470 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 GID4Q8IVV7 300 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 DYNAPQ8N1N2 210 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 C11orf44Q8N8P7 122 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 OR4C13Q8NGP0 309 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 RANBP3Q9H6Z4 567 aaPredicted RBP16.9■□□□□ 0.3
CSPG5-204ENST00000465441 RAB18Q9NP72 206 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 SLC7A11Q9UPY5 501 aa16.9■□□□□ 0.3
CSPG5-204ENST00000465441 F8VVB4 439 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 F8VWA3 439 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 CHST1O43916 411 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 KRT8P05787 483 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 CHRM2P08172 466 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 RAB13P51153 203 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 C11orf88Q6PI97 169 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 AMIGO2Q86SJ2 522 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 CATSPERDQ86XM0 798 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 KLHDC1Q8N7A1 406 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 OR2T6Q8NHC8 308 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 CFHR4Q92496 578 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 MTCH1Q9NZJ7 389 aa16.89■□□□□ 0.29
CSPG5-204ENST00000465441 WARS2Q9UGM6 360 aaKnown RBP16.89■□□□□ 0.29
CSPG5-204ENST00000465441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.89■□□□□ 0.29
CSPG5-204ENST00000465441 IGKV1-27A0A075B6S5 117 aa16.88■□□□□ 0.29
CSPG5-204ENST00000465441 A0A1W2PQL4 384 aaPredicted RBP16.88■□□□□ 0.29
CSPG5-204ENST00000465441 MEX3AA1L020 520 aaKnown RBP16.88■□□□□ 0.29
CSPG5-204ENST00000465441 INMTO95050 263 aa16.88■□□□□ 0.29
CSPG5-204ENST00000465441 OR2T7P0C7T2 308 aa16.88■□□□□ 0.29
CSPG5-204ENST00000465441 POLR2IP36954 125 aaKnown RBP16.88■□□□□ 0.29
CSPG5-204ENST00000465441 ZDHHC13Q8IUH4 622 aa16.88■□□□□ 0.29
CSPG5-204ENST00000465441 ASCC1Q8N9N2 400 aaKnown RBP16.88■□□□□ 0.29
CSPG5-204ENST00000465441 NKX3-1Q99801 234 aaPredicted RBP16.88■□□□□ 0.29
CSPG5-204ENST00000465441 A0A0G2JK05 382 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 METTL15A6NJ78 407 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 SYT7O43581 403 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 ZNF737O75373 536 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 FASP25445 335 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 FUT6P51993 359 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 PLA1AQ53H76 456 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 CCBE1Q6UXH8 406 aaPredicted RBP16.87■□□□□ 0.29
CSPG5-204ENST00000465441 LIAT1Q6ZQX7 453 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 NPFFR1Q9GZQ6 430 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 GABARAPL1Q9H0R8 117 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 AP4S1Q9Y587 144 aa16.87■□□□□ 0.29
CSPG5-204ENST00000465441 TGP01266 2768 aa16.86■□□□□ 0.29
CSPG5-204ENST00000465441 VGLL3A8MV65 326 aa16.86■□□□□ 0.29
CSPG5-204ENST00000465441 APOL3O95236 402 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms