RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 SLC25A38Q96DW6 304 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 SEH1LQ96EE3 360 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 GPER1Q99527 375 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 CCL19Q99731 98 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 VRK1Q99986 396 aaPredicted RBP7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 NXF2Q9GZY0 626 aaKnown RBP7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 MIXL1Q9H2W2 232 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 SAP30LQ9HAJ7 183 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 LIN7BQ9HAP6 207 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 NEK6Q9HC98 313 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 SMURF1Q9HCE7 757 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 GCM1Q9NP62 436 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 RBFOX1Q9NWB1 397 aaKnown RBP7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 C14orf119Q9NWQ9 140 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 C1orf123Q9NWV4 160 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 NKIRAS2Q9NYR9 191 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 OR5V1Q9UGF6 321 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 IL19Q9UHD0 177 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 NOP16Q9Y3C1 178 aaKnown RBP7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 NF1P21359 2839 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 TLN2Q9Y4G6 2542 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 DSCAML1Q8TD84 2053 aa7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 SETD2Q9BYW2 2564 aaPredicted RBP7.56□□□□□ -1.2
NUDCD3-204ENST00000464812 ABCA2Q9BZC7 2435 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 TMEM272A0A1B0GTI8 110 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 MAGEB3O15480 346 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 AKR7A2O43488 359 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 RP2O75695 350 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 CYB5R3P00387 301 aaPredicted RBP7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 TFF1P04155 84 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 PGA5P0DJD9 388 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 TMEM225BP0DP42 221 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 VSIG8P0DPA2 414 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 BMP4P12644 408 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 SERPINA2P20848 420 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 CD80P33681 288 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 SRP9P49458 86 aaKnown RBP7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 RORCP51449 518 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 ERVK11-1P61568 191 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 IL24Q13007 206 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 RIN1Q13671 783 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 AWAT2Q6E213 333 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 ASCL4Q6XD76 172 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 ZNF573Q86YE8 665 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 GCSAMQ8N6F7 178 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 SPERTQ8NA61 448 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 POC1AQ8NBT0 407 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 TMEM104Q8NE00 496 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 FAM46BQ96A09 425 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 FAM3DQ96BQ1 224 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 FOXRED1Q96CU9 486 aaPredicted RBP7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 DIRC2Q96SL1 478 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 NRIP2Q9BQI9 281 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 NICN1Q9BSH3 213 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 PKIBQ9C010 78 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 MS4A5Q9H3V2 200 aa7.55□□□□□ -1.2
NUDCD3-204ENST00000464812 A0A0A6YYD4 124 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 hCG_1807616A0A1W2PRN6 198 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 TMEM14DPA8MWL7 114 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 TPD52L2O43399 206 aaKnown RBP7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 CDC14BO60729 498 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 HPGDSO60760 199 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 KDM4BO94953 1096 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 ZNF205O95201 554 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 BPNT1O95861 308 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 IGHV4-39P01824 125 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 EIF4EP06730 217 aaKnown RBP7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 TNFSF4P23510 183 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 CEBPDP49716 269 aaPredicted RBP7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 GMFBP60983 142 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 DGUOKQ16854 277 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 PCGF3Q3KNV8 242 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 C2orf76Q3KRA6 126 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 PIGYQ3MUY2 71 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 SLC22A6Q4U2R8 563 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 LAX1Q8IWV1 398 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 SAXO1Q8IYX7 474 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 PNLDC1Q8NA58 520 aaKnown RBP7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 PXT1Q8NFP0 134 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 MCFD2Q8NI22 146 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 TBC1D15Q8TC07 691 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 Q8TCH9 128 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 CEP19Q96LK0 163 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 GAL3ST1Q99999 423 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 WDR13Q9H1Z4 485 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 BANF2Q9H503 90 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 FN3KRPQ9HA64 309 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 HES4Q9HCC6 221 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 PTTG2Q9NZH5 202 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 IL36GQ9NZH8 169 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 ING4Q9UNL4 249 aa7.54□□□□□ -1.2
NUDCD3-204ENST00000464812 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
NUDCD3-204ENST00000464812 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-204ENST00000464812 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
NUDCD3-204ENST00000464812 IGHV1-69-2A0A0G2JMI3 117 aa7.53□□□□□ -1.2
NUDCD3-204ENST00000464812 SRRM5B3KS81 715 aa7.53□□□□□ -1.2
NUDCD3-204ENST00000464812 CTDSP2O14595 271 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms