RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 UBDO15205 165 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 NUPL2O15504 423 aaKnown RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 CYTH3O43739 400 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 CALB1P05937 261 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 RPS17P08708 135 aaKnown RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 CD3GP09693 182 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 LIPCP11150 499 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 F2RP25116 425 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 GNRHRP30968 328 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 COILP38432 576 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 IDH2P48735 452 aaKnown RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF121P58317 390 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 RPL18AQ02543 176 aaKnown RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 MGAT3Q09327 533 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 KIR2DS1Q14954 304 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 TRAM1Q15629 374 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ZSCAN26Q16670 478 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 SMUG1Q53HV7 270 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 CCNJQ5T5M9 372 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 FAM27D1Q5T7N8 215 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF880Q6PDB4 577 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ITPRIPQ8IWB1 547 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ACBD4Q8NC06 268 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 OR4K2Q8NGD2 314 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 OR6Q1Q8NGQ2 317 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 PIGXQ8TBF5 258 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 PHOSPHO2Q8TCD6 241 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 TMEM234Q8WY98 164 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 RGP1Q92546 391 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 FLYWCH2Q96CP2 140 aaKnown RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 WDR34Q96EX3 536 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF681Q96N22 645 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 STACQ99469 402 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 PDCD1LG2Q9BQ51 273 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF2Q9BSG1 426 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 NXF2Q9GZY0 626 aaKnown RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 MFSD1Q9H3U5 465 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 RPF2Q9H7B2 306 aaKnown RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 KCNJ16Q9NPI9 418 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 FBXO6Q9NRD1 293 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-205ENST00000464541 SLC2A9Q9NRM0 540 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 KIAA0232Q92628 1395 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 A0A0B4J2E0 115 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 A0A1B0GX12 115 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 PFDN6O15212 129 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 ACOX3O15254 700 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 DPM1O60762 260 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 SRP72O76094 671 aaKnown RBP3.17□□□□□ -1.9
PTCD3-205ENST00000464541 TTC4O95801 387 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 IGKV1-17P01599 117 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 LIMS3P0CW19 117 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 LIMS4P0CW20 117 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 TCP1P17987 556 aaKnown RBP3.17□□□□□ -1.9
PTCD3-205ENST00000464541 HCAR3P49019 387 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 TUFMP49411 452 aaKnown RBP3.17□□□□□ -1.9
PTCD3-205ENST00000464541 FABP6P51161 128 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 STC1P52823 247 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 OR12D2P58182 307 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 SEMG2Q02383 582 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 GUSBP1Q15486 140 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF726P1Q15940 193 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 C12orf54Q6X4T0 127 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 TEX43Q6ZNM6 134 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 SHISA6Q6ZSJ9 500 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 NEGR1Q7Z3B1 354 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 C10orf67Q8IYJ2 551 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 HS3ST5Q8IZT8 346 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 HSD17B11Q8NBQ5 300 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 OR5B17Q8NGF7 314 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 YIPF6Q96EC8 236 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 SGTBQ96EQ0 304 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 DYNLL2Q96FJ2 89 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 OR10C1Q96KK4 312 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 OSBPL11Q9BXB4 747 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 CHRNA10Q9GZZ6 450 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 PRORYQ9H606 182 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 RHOFQ9HBH0 211 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 ABCB9Q9NP78 766 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 MRPL40Q9NQ50 206 aaKnown RBP3.17□□□□□ -1.9
PTCD3-205ENST00000464541 GUCA1BQ9UMX6 200 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 PSG8Q9UQ74 426 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 OR51B2Q9Y5P1 312 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 MTCH2Q9Y6C9 303 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 KIF26AQ9ULI4 1882 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-205ENST00000464541 MAPK8IP3Q9UPT6 1336 aa3.17□□□□□ -1.9
PTCD3-205ENST00000464541 A0A1W2PQL4 384 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-205ENST00000464541 C7orf66A4D0T2 115 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 SYCE1LA8MT33 242 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 RBFOX2O43251 390 aaKnown RBP eCLIP3.16□□□□□ -1.93e-7■□□□□ 9.8
PTCD3-205ENST00000464541 MPZL2O60487 215 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 UPK1BO75841 260 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 GABARAPO95166 117 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 LYPLA2O95372 231 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 PTHP01270 115 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 HLA-DPB1P04440 258 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 ISG15P05161 165 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 IL6P05231 212 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF35P13682 527 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 PRPS1L1P21108 318 aa3.16□□□□□ -1.9
PTCD3-205ENST00000464541 USF1P22415 310 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms