RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 NR2C2APQ86WQ0 139 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 CROCCP3Q8IVE0 287 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 OR52H1Q8NGJ2 320 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 SGK3Q96BR1 496 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 FGGYQ96C11 551 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 URB1-AS1Q96HZ7 61 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 FAM71F1Q96KD3 344 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-204ENST00000462658 GPR84Q9NQS5 396 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF275Q9NSD4 429 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-204ENST00000462658 DAPK2Q9UIK4 370 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 SH3BGRL2Q9UJC5 107 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 FOXJ3Q9UPW0 622 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 MED12LQ86YW9 2145 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 COL12A1Q99715 3063 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 FREM1Q5H8C1 2179 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 TRAV8-7A0A075B6U6 113 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 TRGV8A0A0C4DH27 118 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 A0A1W2PR80 420 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ANXA2P2A6NMY6 339 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 TNFRSF13BO14836 293 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 RGS5O15539 181 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 LMX1BO60663 402 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 MTRF1O75570 445 aaKnown RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 IGLV3-1P01715 115 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 MAS1P04201 325 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 SERPINA5P05154 406 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 SLC2A2P11168 524 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 CCL2P13500 99 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 IGFBP3P17936 291 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ADRA2CP18825 462 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 CCNOP22674 350 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 PSMD7P51665 324 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 CASP6P55212 293 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 LINC00205P59089 165 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 SNAI3Q3KNW1 292 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 SLC25A35Q3KQZ1 300 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 TMEM211Q6ICI0 200 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 Q6ZTK2 550 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 BHLHA15Q7RTS1 189 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF584Q8IVC4 421 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 SERPINA12Q8IW75 414 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 C17orf78Q8N4C9 275 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 PARP16Q8N5Y8 322 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 WDR31Q8NA23 367 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ST6GALNAC3Q8NDV1 305 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 CCDC54Q8NEL0 328 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 OR5D14Q8NGL3 314 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 OR1J2Q8NGS2 313 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 S100ZQ8WXG8 99 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ACOT12Q8WYK0 555 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ADAT3Q96EY9 351 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 WBP1Q96G27 269 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 POM121L2Q96KW2 1035 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 LYZL4Q96KX0 146 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 CEP19Q96LK0 163 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF75AQ96N20 296 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 GFI1Q99684 422 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 SLC30A2Q9BRI3 323 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 C1QTNF5Q9BXJ0 243 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 PIGMQ9H3S5 423 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 TAS2R4Q9NYW5 299 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 COMMD3Q9UBI1 195 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 PEMTQ9UBM1 199 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 CKLFQ9UBR5 152 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF629Q9UEG4 869 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 CMAHPQ9Y471 501 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 V9GY05 133 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 V9GYS6 101 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 GTF3C1Q12789 2109 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 SVILO95425 2214 aa6.26□□□□□ -1.41
UBE4B-204ENST00000462658 PRRC2CQ9Y520 2896 aaKnown RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 NCOA6Q14686 2063 aaPredicted RBP6.26□□□□□ -1.41
UBE4B-204ENST00000462658 LOC390937A0A1W2PQ73 354 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 RPS10-NUDT3A0A1W2PQS6 291 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 A6NIN4 97 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 IFITM5A6NNB3 132 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 A8MXE2 369 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 CLDN25C9JDP6 229 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 XRCC2O43543 280 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 DHRS3O75911 302 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 PLA2G2AP14555 144 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 CBR1P16152 277 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF14P17017 642 aaPredicted RBP6.25□□□□□ -1.41
UBE4B-204ENST00000462658 ATF1P18846 271 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 IL32P24001 234 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 DDOSTP39656 456 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 PPP3R1P63098 170 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 DYNC1I2Q13409 638 aaKnown RBP6.25□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF846Q147U1 533 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 TBC1D28Q2M2D7 210 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 GLYATL3Q5SZD4 288 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 DDI2Q5TDH0 399 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 DCAF12L2Q5VW00 463 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 GLT8D1Q68CQ7 371 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 ASPHD2Q6ICH7 369 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 Q6ZSR3 168 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 NCCRP1Q6ZVX7 275 aaPredicted RBP6.25□□□□□ -1.41
UBE4B-204ENST00000462658 ZDHHC23Q8IYP9 409 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 SLC30A7Q8NEW0 376 aa6.25□□□□□ -1.41
UBE4B-204ENST00000462658 OR1M1Q8NGA1 313 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms