RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 PRSS22Q9GZN4 317 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 PLEKHA1Q9HB21 404 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 OR52A1Q9UKL2 312 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 R4GMQ9 66 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 WNK1Q9H4A3 2382 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 PQLC2LA1A4F0 135 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 CHST1O43916 411 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 IGLV3-1P01715 115 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 TTRP02766 147 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 ALDOBP05062 364 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 CHRM2P08172 466 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 EDDM3BP56851 147 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 OR12D2P58182 307 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 CXCR4P61073 352 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
SKA3-204ENST00000462482 DYNC1I2Q13409 638 aaKnown RBP12.47□□□□□ -0.41
SKA3-204ENST00000462482 FLOT2Q14254 428 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 CNN3Q15417 329 aaKnown RBP12.47□□□□□ -0.41
SKA3-204ENST00000462482 SAMD5Q5TGI4 173 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 CRIP3Q6Q6R5 217 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 GDPD3Q7L5L3 318 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 ELMOD2Q8IZ81 293 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 OR4F17Q8NGA8 305 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 MALSU1Q96EH3 234 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 OR4F4Q96R69 305 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 PKIBQ9C010 78 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 COPS3Q9UNS2 423 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 TCF19Q9Y242 345 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 SNX5Q9Y5X3 404 aa12.47□□□□□ -0.41
SKA3-204ENST00000462482 FAM230AA0A1W2PPH8 454 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 CCDC182A6NF36 153 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 DHRS7CA6NNS2 312 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 PIN1P1O15428 100 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 FKBP6O75344 327 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 RBP4P02753 201 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 ZNF728P0DKX0 622 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 ZNF273Q14593 569 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 KPRPQ5T749 579 aaPredicted RBP12.46□□□□□ -0.41
SKA3-204ENST00000462482 TMEM42Q69YG0 159 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 MEPCEQ7L2J0 689 aaKnown RBP12.46□□□□□ -0.41
SKA3-204ENST00000462482 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 NDUFA11Q86Y39 141 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 SLC35F2Q8IXU6 374 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 BATF2Q8N1L9 274 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 C11orf42Q8N5U0 333 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 SGCDQ92629 289 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 R3HDM4Q96D70 268 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 NRBF2Q96F24 287 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 APOL4Q9BPW4 351 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 ADI1Q9BV57 179 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 V9GYS6 101 aa12.46□□□□□ -0.41
SKA3-204ENST00000462482 FAM90A8PA6NJQ4 464 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 K7N7A8 449 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 F2RL2O00254 374 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 SERPINA3P01011 423 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 KRT8P05787 483 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 T-ENOLP0DO92 83 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 MPZP25189 248 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 COL10A1Q03692 680 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 IL24Q13007 206 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 PTGES3Q15185 160 aaKnown RBP12.45□□□□□ -0.42
SKA3-204ENST00000462482 SSX2Q16385 188 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 DNAL1Q4LDG9 190 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 ANGPTL5Q86XS5 388 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 LYG1Q8N1E2 194 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 OR14K1Q8NGZ2 314 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 TRMT10AQ8TBZ6 339 aaKnown RBP12.45□□□□□ -0.42
SKA3-204ENST00000462482 PIFOQ8TCI5 191 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 ZNF702PQ9H963 129 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 HES4Q9HCC6 221 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 CLN6Q9NWW5 311 aa12.45□□□□□ -0.42
SKA3-204ENST00000462482 hADV38S2A0JD32 116 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 PRR32B1ATL7 298 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 GYG2O15488 501 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 PRKYO43930 277 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 GATBO75879 557 aaKnown RBP12.44□□□□□ -0.42
SKA3-204ENST00000462482 DNAJC8O75937 253 aaPredicted RBP12.44□□□□□ -0.42
SKA3-204ENST00000462482 PRB2P02812 416 aaPredicted RBP12.44□□□□□ -0.42
SKA3-204ENST00000462482 RAB13P51153 203 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 MEF2CQ06413 473 aaPredicted RBP12.44□□□□□ -0.42
SKA3-204ENST00000462482 SLX4IPQ5VYV7 408 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 HIST2H2BDQ6DRA6 164 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 GID4Q8IVV7 300 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 YIPF7Q8N8F6 280 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 OR11H6Q8NGC7 330 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 NDNFQ8TB73 568 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 MRAPQ8TCY5 172 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 CAPSLQ8WWF8 208 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 CEP19Q96LK0 163 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 ZNF714Q96N38 554 aa12.44□□□□□ -0.42
SKA3-204ENST00000462482 A6NDX4 124 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 A6NIN4 97 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 SYT7O43581 403 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 RPP14O95059 124 aaKnown RBP12.43□□□□□ -0.42
SKA3-204ENST00000462482 ALX3O95076 343 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 CYB5AP00167 134 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 IGHV1-8P0DP01 117 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms