RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 SERTAD4Q9NUC0 356 aa13.02□□□□□ -0.33
COL7A1-204ENST00000462475 TCF19Q9Y242 345 aa13.02□□□□□ -0.33
COL7A1-204ENST00000462475 TMEM14AQ9Y6G1 99 aa13.02□□□□□ -0.33
COL7A1-204ENST00000462475 V9GYS6 101 aa13.02□□□□□ -0.33
COL7A1-204ENST00000462475 A0A1B0GTI1 187 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 hCG_1809904A0A1W2PP81 198 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 A0A1W2PPE2 198 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 A0A1W2PR64 198 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 A0A1W2PRV1 198 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 C17orf98A8MV24 154 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 VGLL3A8MV65 326 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 DLGAP1O14490 977 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 MPZP25189 248 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 RAB13P51153 203 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 CRISP1P54107 249 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 CXCR4P61073 352 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 ESRRGP62508 458 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 FAM189A2Q15884 450 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 NSUN5P1Q3KNT7 163 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 FBLN7Q53RD9 439 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 LDLRAD2Q5SZI1 272 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 ZNF322Q6U7Q0 402 aaPredicted RBP13.01□□□□□ -0.33
COL7A1-204ENST00000462475 CCBE1Q6UXH8 406 aaPredicted RBP13.01□□□□□ -0.33
COL7A1-204ENST00000462475 Q6ZPA2 131 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 SPATA24Q86W54 205 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 ANGPTL5Q86XS5 388 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 TMEM219Q86XT9 240 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 CALHM1Q8IU99 346 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 ELMOD2Q8IZ81 293 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 CCDC197Q8NCU1 140 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 OR14K1Q8NGZ2 314 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 MOB1AQ9H8S9 216 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 PAPOLBQ9NRJ5 636 aaKnown RBP13.01□□□□□ -0.33
COL7A1-204ENST00000462475 DNAJB9Q9UBS3 223 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 R4GMQ9 66 aa13.01□□□□□ -0.33
COL7A1-204ENST00000462475 ODF3BA8MYP8 253 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 FKBP6O75344 327 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 FBXO24O75426 580 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 ARG1P05089 322 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 CD28P10747 220 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 ERVK11-1P61568 191 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 SLC35F2Q8IXU6 374 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 Q8N2B8 174 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 ASCC1Q8N9N2 400 aaKnown RBP13□□□□□ -0.33
COL7A1-204ENST00000462475 ADGRL4Q9HBW9 690 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 OR52A1Q9UKL2 312 aa13□□□□□ -0.33
COL7A1-204ENST00000462475 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 A6NDX4 124 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 F8VVB4 439 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 F8VWA3 439 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 K7N7A8 449 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 PLXNB1O43157 2135 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 ZNF737O75373 536 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 HOXB6P17509 224 aaKnown RBP12.99□□□□□ -0.33
COL7A1-204ENST00000462475 DAPP51397 102 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 COL10A1Q03692 680 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 FLOT2Q14254 428 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 PTGES3Q15185 160 aaKnown RBP12.99□□□□□ -0.33
COL7A1-204ENST00000462475 OXLD1Q5BKU9 147 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 FAHD1Q6P587 224 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 TRMT10AQ8TBZ6 339 aaKnown RBP12.99□□□□□ -0.33
COL7A1-204ENST00000462475 WIPF2Q8TF74 440 aaPredicted RBP12.99□□□□□ -0.33
COL7A1-204ENST00000462475 DNAJC9Q8WXX5 260 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 FOXRED1Q96CU9 486 aaPredicted RBP12.99□□□□□ -0.33
COL7A1-204ENST00000462475 CDCA4Q9BXL8 241 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 MMP28Q9H239 520 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 MRM2Q9UI43 246 aaKnown RBP12.99□□□□□ -0.33
COL7A1-204ENST00000462475 SLC22A13Q9Y226 551 aa12.99□□□□□ -0.33
COL7A1-204ENST00000462475 TBL2Q9Y4P3 447 aaKnown RBP12.99□□□□□ -0.33
COL7A1-204ENST00000462475 TCRBV3S1A0A5B6 114 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 FAM107AO95990 144 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 ZNF728P0DKX0 622 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 JUNBP17275 347 aaPredicted RBP12.98□□□□□ -0.33
COL7A1-204ENST00000462475 EDDM3BP56851 147 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 IL24Q13007 206 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 CNN3Q15417 329 aaKnown RBP12.98□□□□□ -0.33
COL7A1-204ENST00000462475 SSX2Q16385 188 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 AADACL4Q5VUY2 407 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 ZNF626Q68DY1 528 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 Q6ZSR3 168 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 MEPCEQ7L2J0 689 aaKnown RBP12.98□□□□□ -0.33
COL7A1-204ENST00000462475 SSX6Q7RTT6 188 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 DTX3Q8N9I9 347 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 OR13D1Q8NGV5 346 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 RPS4Y2Q8TD47 263 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 PKIBQ9C010 78 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 ABCB10Q9NRK6 738 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 SNX5Q9Y5X3 404 aa12.98□□□□□ -0.33
COL7A1-204ENST00000462475 FAM230AA0A1W2PPH8 454 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 DHRS7CA6NNS2 312 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 ADARB2-AS1A8MUL3 147 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 ZNF670-ZNF695F2Z2N8 137 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 H3BSH0 61 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 PIN1P1O15428 100 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 MITFO75030 526 aaPredicted RBP12.97□□□□□ -0.33
COL7A1-204ENST00000462475 IGHV1-8P0DP01 117 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 CCL1P22362 96 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 EPHA2P29317 976 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 ODF4Q2M2E3 257 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms