RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 IGHV1-46P01743 117 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 LCATP04180 440 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 FGF2P09038 288 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 H2BFMP0C1H6 154 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 LYNX1P0DP58 116 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 MMP9P14780 707 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 TUBG1P23258 451 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 COL8A2P25067 703 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 AQP4P55087 323 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF121P58317 390 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 GRB2P62993 217 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 MFGE8Q08431 387 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 TMED1Q13445 227 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 RIPK1Q13546 671 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 CLEC12BQ2HXU8 276 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 LCN1P1Q5VSP4 162 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 SHEQ5VZ18 495 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 DEGS2Q6QHC5 323 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 ARL9Q6T311 187 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 PLEKHG7Q6ZR37 379 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 C1orf174Q8IYL3 243 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF679Q8IYX0 411 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 OR5AS1Q8N127 324 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 DHRSXQ8N5I4 330 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF283Q8N7M2 679 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 CNIH3Q8TBE1 160 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 YIPF5Q969M3 257 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 SPTSSAQ969W0 71 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 SGK3Q96BR1 496 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 LGALS12Q96DT0 336 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 TBX5Q99593 518 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 RHNO1Q9BSD3 238 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 PPP1R3EQ9H7J1 279 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 AMBNQ9NP70 447 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 C8orf4Q9NR00 106 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 TUBG2Q9NRH3 451 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 IMPAD1Q9NX62 359 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 LAMP5Q9UJQ1 280 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 EXOGQ9Y2C4 368 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 CHD3Q12873 2000 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 hCG_1809904A0A1W2PP81 198 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 A0A1W2PPE2 198 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 A0A1W2PR64 198 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 IQCF6A8MYZ5 107 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 H0YL77 283 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 WNT9BO14905 357 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 MLNRO43193 412 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 SPRY3O43610 288 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 RP2O75695 350 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 IGLV3-1P01715 115 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 OR2T7P0C7T2 308 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 DBTP11182 482 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 CAPGP40121 348 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF81P51508 661 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 CCL8P80075 99 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 FAM3AP98173 230 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 TAF13Q15543 124 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 ODF3L2Q3SX64 289 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 C6orf52Q5T4I8 152 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 DCAF12L2Q5VW00 463 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 MEDAGQ5VYS4 303 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 TTC23Q5W5X9 447 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF322Q6U7Q0 402 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF555Q8NEP9 628 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 OR8B12Q8NGG6 310 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 OR2T27Q8NH04 317 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 PRSS3P2Q8NHM4 247 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 C10orf105Q8TEF2 133 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 CYGBQ8WWM9 190 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 ASB17Q8WXJ9 295 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 DYNLRB1Q9NP97 96 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 DECR2Q9NUI1 292 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 N6AMT1Q9Y5N5 214 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 CACNG2Q9Y698 323 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 ZFHX3Q15911 3703 aa6.72□□□□□ -1.33
ECHDC1-212ENST00000461239 CSPG4Q6UVK1 2322 aa6.71□□□□□ -1.33
ECHDC1-212ENST00000461239 hCG_38984A0A1B0GV85 526 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 CD300LBA8K4G0 201 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 ZNF670-ZNF695F2Z2N8 137 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 H0YAE9 185 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 TIMM8AO60220 97 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 MPZL2O60487 215 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 CD55P08174 381 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 DAOP14920 347 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 ACKR3P25106 362 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 HSD11B1P28845 292 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 IL5RAQ01344 420 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 LIPNQ5VXI9 398 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 UNQ6126/PRO20091Q6UXV3 157 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 Q6ZSV7 163 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 PGAP1Q75T13 922 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 ZNF786Q8N393 782 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 MAPK1IP1LQ8NDC0 245 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 BHLHE23Q8NDY6 225 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 OR8G5Q8NG78 346 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 OR10H4Q8NGA5 316 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 OR52I1Q8NGK6 324 aa6.71□□□□□ -1.34
ECHDC1-212ENST00000461239 OR5L1Q8NGL2 311 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms