RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 CENPNQ96H22 339 aaPredicted RBP4.28□□□□□ -1.72
SF3A3-202ENST00000460925 TMEM56Q96MV1 263 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 FEVQ99581 238 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 C7orf50Q9BRJ6 194 aaKnown RBP4.28□□□□□ -1.72
SF3A3-202ENST00000460925 MED18Q9BUE0 208 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 DGCR6LQ9BY27 220 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 UCK2Q9BZX2 261 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 PKIBQ9C010 78 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 PIGMQ9H3S5 423 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 DCLRE1BQ9H816 532 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 ACKR4Q9NPB9 350 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 NIT2Q9NQR4 276 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 BIN3Q9NQY0 253 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 SIRT7Q9NRC8 400 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 OR6C3Q9NZP0 311 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 MLXQ9UH92 298 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 KCNG2Q9UJ96 466 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 MOKQ9UQ07 419 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 MED31Q9Y3C7 131 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 MMP24Q9Y5R2 645 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 TMEM56-RWDD3S4R434 201 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 HIVEP3Q5T1R4 2406 aa4.28□□□□□ -1.72
SF3A3-202ENST00000460925 NCOA6Q14686 2063 aaPredicted RBP4.28□□□□□ -1.72
SF3A3-202ENST00000460925 CACNA1CQ13936 2221 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TRAV36DV7A0A075B6V5 113 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TEX13DA0A0J9YY54 714 aaPredicted RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 A8MVM7 634 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 EFCAB9A8MZ26 197 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 G3V2T6 193 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 BLOC1S5-TXNDC5H3BN57 136 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TEX46H3BTG2 121 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 H7C1C5 153 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 K7EP13 123 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 M0QZ24 198 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SULT2B1O00204 365 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 DLGAP1O14490 977 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 PHYHO14832 338 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 NDUFB8O95169 186 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 PPP1R3DO95685 299 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 CLIC3O95833 236 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 FSHBP01225 129 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SLPIP03973 132 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TFAP2AP05549 437 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 FCGR1AP12314 374 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 DAOP14920 347 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 AREGP15514 252 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 RPA2P15927 270 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ABOP16442 354 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 GSTM3P21266 225 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 HLA-DMAP28067 261 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 GTF2E2P29084 291 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ERP29P30040 261 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SSTR2P30874 369 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 AQP2P41181 271 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 RBM34P42696 430 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 MAP2K4P45985 399 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SERPINB10P48595 397 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 AQP4P55087 323 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 LSM6P62312 80 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 LCN6P62502 163 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 HERV-K104P63124 156 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 PRKCDQ05655 676 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 RPL18Q07020 188 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 IL18R1Q13478 541 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 HNF4GQ14541 408 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SLC17A1Q14916 467 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 GUK1Q16774 197 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TMEM249Q2WGJ8 235 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ZBED5Q49AG3 693 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 OGFRL1Q5TC84 451 aaPredicted RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 OTPQ5XKR4 325 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 RTL6Q6ICC9 239 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SLC27A4Q6P1M0 643 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 FAHD2BQ6P2I3 314 aaPredicted RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 BTNL3Q6UXE8 466 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF620Q6ZNG0 422 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TMPPEQ6ZT21 453 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 MRPL21Q7Z2W9 205 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ZFP82Q8N141 532 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SVOPLQ8N434 492 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF843Q8N446 348 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 C17orf78Q8N4C9 275 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 CLDN22Q8N7P3 220 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 C9orf106Q8NAJ2 232 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 CCDC54Q8NEL0 328 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 ZPLD1Q8TCW7 415 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TRUB1Q8WWH5 349 aaKnown RBP4.27□□□□□ -1.73
SF3A3-202ENST00000460925 OSTF1Q92882 214 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 MIB2Q96AX9 1013 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 SPSB1Q96BD6 273 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 FAHD2AQ96GK7 314 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TNFRSF13CQ96RJ3 184 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 MBOAT4Q96T53 435 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 PFDN5Q99471 154 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 RNF2Q99496 336 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 TMEM43Q9BTV4 400 aa4.27□□□□□ -1.73
SF3A3-202ENST00000460925 POLR2J2Q9GZM3 115 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms