RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SULT1A2P50226 295 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 CAV2P51636 162 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 CLDN15P56746 228 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 B3GALT5-AS1P59052 145 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 S100A10P60903 97 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 HERV-K104P61576 105 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 FAM3AP98173 230 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 RAB32Q13637 225 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 IL13RA2Q14627 380 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 SWI5Q1ZZU3 235 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 SMUG1Q53HV7 270 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 BEX5Q5H9J7 111 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 PABPC1L2AQ5JQF8 200 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 UNQ6126/PRO20091Q6UXV3 157 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 LINC00596Q86U02 117 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 UBAC2Q8NBM4 344 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 OR5D18Q8NGL1 313 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 OR2I1PQ8NGU4 316 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 SPSB4Q96A44 273 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 FBXO17Q96EF6 278 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 LIN37Q96GY3 246 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-202ENST00000459727 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 PRRX2Q99811 253 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 MESP1Q9BRJ9 268 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 DDA1Q9BW61 102 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 OR2H1Q9GZK4 316 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 RIMS4Q9H426 269 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-202ENST00000459727 PLK3Q9H4B4 646 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 RNF122Q9H9V4 155 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 PROK2Q9HC23 129 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 CRLF2Q9HC73 371 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 CYTL1Q9NRR1 136 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 FAM212BQ9NTI7 297 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-202ENST00000459727 STRAPQ9Y3F4 350 aaKnown RBP7.71□□□□□ -1.18
HDAC3-202ENST00000459727 TMED3Q9Y3Q3 217 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 C5orf42Q9H799 3197 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 FREM3P0C091 2139 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 IGKV3D-15A0A087WSY6 115 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 KIR2DS1A0A191URI9 304 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 hCG_38984A0A1B0GV85 526 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 A0A1W2PP11 408 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 LRP5LA4QPB2 252 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 F8W036 122 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 ADAP1O75689 374 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 DIRAS3O95661 229 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 CDS2O95674 445 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 KNG1P01042 644 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 HEXAP06865 529 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 H2AFB1P0C5Y9 115 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SEC11BP0C7V7 166 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF32P17041 273 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 PVALBP20472 110 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-202ENST00000459727 FUT3P21217 361 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 GLRA1P23415 457 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 ACP1P24666 158 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 DUSP1P28562 367 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 PTGER4P35408 488 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 KIR2DS4P43632 304 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 P2RY1P47900 373 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 CYB561P49447 251 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 RBM39Q14498 530 aaKnown RBP7.7□□□□□ -1.18
HDAC3-202ENST00000459727 KIR2DS1Q14954 304 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 HYAL4Q2M3T9 481 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 MPV17LQ2QL34 196 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SNAI3Q3KNW1 292 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 PHYHD1Q5SRE7 291 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 HAGHLQ6PII5 290 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SLC23A3Q6PIS1 610 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 C6orf15Q6UXA7 325 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-202ENST00000459727 RAB11FIP2Q7L804 512 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 C6orf201Q7Z4U5 140 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 GGNQ86UU5 652 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SKA3Q8IX90 412 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 LFNGQ8NES3 379 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 Q8NFD4 153 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 NPRL2Q8WTW4 380 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 TMED6Q8WW62 240 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 GTF3AQ92664 365 aaKnown RBP7.7□□□□□ -1.18
HDAC3-202ENST00000459727 MOB3AQ96BX8 217 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 IP6K3Q96PC2 410 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 MICU1Q9BPX6 476 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 FAM173AQ9BQD7 235 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SOX7Q9BT81 388 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 C1QTNF6Q9BXI9 259 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 C1QTNF5Q9BXJ0 243 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SRXN1Q9BYN0 137 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 RHOFQ9HBH0 211 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SPACA1Q9HBV2 294 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 TREM1Q9NP99 234 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 PLSCR2Q9NRY7 297 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 GPR173Q9NS66 373 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 GSKIPQ9P0R6 139 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 TCFL5Q9UL49 500 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 KPTNQ9Y664 436 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 FER1L5A0AVI2 2057 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 DCHS1Q96JQ0 3298 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 PCDH15Q96QU1 1955 aa7.7□□□□□ -1.18
HDAC3-202ENST00000459727 SPTBP11277 2137 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 CCDC187A0A096LP49 1063 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 IGHV3-15A0A0B4J1V0 119 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms