RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 HPS1Q92902 700 aa13.98□□□□□ -0.17
CCDC90B-202ENST00000455220 SLAMF9Q96A28 289 aa13.98□□□□□ -0.17
CCDC90B-202ENST00000455220 CEP19Q96LK0 163 aa13.98□□□□□ -0.17
CCDC90B-202ENST00000455220 S100A13Q99584 98 aa13.98□□□□□ -0.17
CCDC90B-202ENST00000455220 METTL9Q9H1A3 318 aa13.98□□□□□ -0.17
CCDC90B-202ENST00000455220 OR5V1Q9UGF6 321 aa13.98□□□□□ -0.17
CCDC90B-202ENST00000455220 ING4Q9UNL4 249 aa13.98□□□□□ -0.17
CCDC90B-202ENST00000455220 hCG_1807616A0A1W2PRN6 198 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 TMEM14DPA8MWL7 114 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 SRRM5B3KS81 715 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 TRAPPC2LH3BP13 241 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 SFTPBP07988 381 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 VSIG8P0DPA2 414 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 NPBWR2P48146 333 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 RSU1Q15404 277 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 C2orf76Q3KRA6 126 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 ELP2Q6IA86 826 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 Q8IYB0 196 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 GCSAMQ8N6F7 178 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 OR11L1Q8NGX0 322 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 LRRC29Q8WV35 223 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 ACOT12Q8WYK0 555 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 RDH5Q92781 318 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 ZNF488Q96MN9 340 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 NXF2Q9GZY0 626 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 HES4Q9HCC6 221 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 RNF7Q9UBF6 113 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 CACNG2Q9Y698 323 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 ARID1AO14497 2285 aa13.97□□□□□ -0.17
CCDC90B-202ENST00000455220 LRRC30A6NM36 301 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 F8VVB4 439 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 F8VWA3 439 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 AKR7A2O43488 359 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 NDUFS7O75251 213 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 RP2O75695 350 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 PAHP00439 452 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 SNRPBP14678 240 aaKnown RBP13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 BCL3P20749 454 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 UNC119Q13432 240 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 GPR176Q14439 515 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 SLC22A6Q4U2R8 563 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 OR2W3Q7Z3T1 314 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 LGALS14Q8TCE9 139 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 YIPF5Q969M3 257 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 KCNK15Q9H427 330 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 DLL4Q9NR61 685 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 TMEM106BQ9NUM4 274 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 RBFOX1Q9NWB1 397 aaKnown RBP13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 SPATA2Q9UM82 520 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 ETV7Q9Y603 341 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 A3GALT2U3KPV4 340 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 CSMD2Q7Z408 3487 aa13.96□□□□□ -0.17
CCDC90B-202ENST00000455220 A0A075B6Q4 140 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 A0A1W2PP11 408 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 TMEM178BH3BS89 294 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 CDC14BO60729 498 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 LY6HO94772 140 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 IGHV4-39P01824 125 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 DAOP14920 347 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 COL8A2P25067 703 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 BMXP51813 675 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 ZNF404Q494X3 552 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 CDH24Q86UP0 819 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 C1orf87Q8N0U7 546 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 TMEM104Q8NE00 496 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 OR10K1Q8NGX5 313 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 KCNG3Q8TAE7 436 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 CCL17Q92583 94 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 PTX4Q96A99 478 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 GSX2Q9BZM3 304 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 CST11Q9H112 138 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 ELL3Q9HB65 397 aaPredicted RBP13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 PCDHB16Q9NRJ7 776 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 DCAF16Q9NXF7 216 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 TREM2Q9NZC2 230 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 EDARQ9UNE0 448 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 PLEKHA6Q9Y2H5 1048 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 NPTNQ9Y639 398 aa13.96□□□□□ -0.18
CCDC90B-202ENST00000455220 CYB5R3P00387 301 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 IRF2P14316 349 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 EGR1P18146 543 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 SERPINA2P20848 420 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 RBMXP38159 391 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 FGF12P61328 243 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 HFEQ30201 348 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 NHLRC3Q5JS37 347 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 OR10K2Q6IF99 312 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 OR5H6Q8NGV6 325 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 MRPS24Q96EL2 167 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 HMG20AQ9NP66 347 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 RASL12Q9NYN1 266 aa13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 ANKRD17O75179 2603 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-202ENST00000455220 WNT9BO14905 357 aa13.94□□□□□ -0.18
CCDC90B-202ENST00000455220 HTR3BO95264 441 aa13.94□□□□□ -0.18
CCDC90B-202ENST00000455220 CSTBP04080 98 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-202ENST00000455220 GTF2F2P13984 249 aa13.94□□□□□ -0.18
CCDC90B-202ENST00000455220 RAB6AP20340 208 aa13.94□□□□□ -0.18
CCDC90B-202ENST00000455220 GLRA1P23415 457 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms