RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ESRP2Q9H6T0 727 aaKnown RBP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 GPR160Q9UJ42 338 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM14DPA8MWL7 114 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 OR2A4O95047 310 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 FKBP2P26885 142 aaKnown RBP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 TAS2R46P59540 309 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 HES3Q5TGS1 186 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 SLC25A42Q86VD7 318 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF565Q8N9K5 539 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 ZIC4Q8N9L1 334 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 APH1AQ96BI3 265 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF488Q96MN9 340 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 OR2A7Q96R45 310 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 APC2O95996 2303 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 DHRS7CA6NNS2 312 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM127O75204 238 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 MT-CO3P00414 261 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 NMBP08949 121 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF735P0CB33 412 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 THBS4P35443 961 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 TAS2R31P59538 309 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 RAB1AP62820 205 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 RPS27AP62979 156 aaKnown RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF616Q08AN1 781 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 TUSC1Q2TAM9 212 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 LY6G6FQ5SQ64 297 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF660Q6AZW8 331 aaPredicted RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 HAGHLQ6PII5 290 aaPredicted RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 OR5M9Q8NGP3 310 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 PP6455Q8WZ26 134 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 TSNAXQ99598 290 aaKnown RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM38BQ9NVV0 291 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 UBE2J1Q9Y385 318 aaPredicted RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 IGKV1D-8A0A087WSZ0 117 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 A0A0D9SG52 128 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 PHF1O43189 567 aaPredicted RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 RD3LP0DJH9 198 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 RRASP10301 218 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 CAV2P51636 162 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 PIGPP57054 158 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 ZFP36L1Q07352 338 aaKnown RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 SLC25A24Q6NUK1 477 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 ACOT7LQ6ZUV0 252 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 DTX1Q86Y01 620 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 OR13G1Q8NGZ3 307 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 MEMO1Q9Y316 297 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 H7C2Y5 167 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 CNOT4O95628 575 aaKnown RBP10.44□□□□□ -0.74
SMPD4-213ENST00000454468 UBBP0CG47 229 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF728P0DKX0 622 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF17P17021 662 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 GSK3AP49840 483 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 PCBD1P61457 104 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 RAB35Q15286 201 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 TSC22D1Q15714 1073 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 SLC5A7Q9GZV3 580 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 PROK2Q9HC23 129 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 GPR35Q9HC97 309 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 OR14J1Q9UGF5 321 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 AK3Q9UIJ7 227 aa10.44□□□□□ -0.74
SMPD4-213ENST00000454468 A6NLC8 198 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 ZBTB25P24278 435 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 IDH3GP51553 393 aaPredicted RBP10.43□□□□□ -0.74
SMPD4-213ENST00000454468 SSBP1Q04837 148 aaKnown RBP10.43□□□□□ -0.74
SMPD4-213ENST00000454468 SNTB1Q13884 538 aaKnown RBP10.43□□□□□ -0.74
SMPD4-213ENST00000454468 HIKESHIQ53FT3 197 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 DRAM2Q6UX65 266 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF611Q8N823 705 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 HAS2Q92819 552 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 CHST5Q9GZS9 411 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 WDR13Q9H1Z4 485 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 C5orf66Q9H5L9 145 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 PNRC2Q9NPJ4 139 aaKnown RBP10.43□□□□□ -0.74
SMPD4-213ENST00000454468 TRAV14DV4A0A0A6YYC5 116 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 RPS10-NUDT3A0A1W2PQS6 291 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 WRBO00258 174 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 NTN3O00634 580 aaPredicted RBP10.43□□□□□ -0.74
SMPD4-213ENST00000454468 IGHEP01854 428 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 NPBWR2P48146 333 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 MRPS34P82930 218 aaKnown RBP10.43□□□□□ -0.74
SMPD4-213ENST00000454468 FAM27BQ5VT28 67 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 NANPQ8TBE9 248 aa10.43□□□□□ -0.74
SMPD4-213ENST00000454468 TNRC18O15417 2968 aaPredicted RBP10.43□□□□□ -0.74
SMPD4-213ENST00000454468 C9orf172C9J069 976 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 M0R296 226 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 NGFP01138 241 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 CSRP1P21291 193 aaKnown RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 NOVA1P51513 510 aaKnown RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 SLC25A53Q5H9E4 307 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 DCAF10Q5QP82 559 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR2T2Q6IF00 324 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR2W3Q7Z3T1 314 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 CXorf67Q86X51 503 aaPredicted RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 C17orf78Q8N4C9 275 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR2M7Q8NG81 312 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR5AP2Q8NGF4 316 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 KCNE4Q8WWG9 221 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 CPNE4Q96A23 557 aaPredicted RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR2H1Q9GZK4 316 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms