RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 PRR31Q5SQ13 230 aa9.86□□□□□ -0.83
USP40-210ENST00000454354 KCTD20Q7Z5Y7 419 aa9.86□□□□□ -0.83
USP40-210ENST00000454354 OR2G2Q8NGZ5 317 aa9.86□□□□□ -0.83
USP40-210ENST00000454354 PP6455Q8WZ26 134 aa9.86□□□□□ -0.83
USP40-210ENST00000454354 TAF15Q92804 592 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP40-210ENST00000454354 RNFT2Q96EX2 444 aa9.86□□□□□ -0.83
USP40-210ENST00000454354 C1RLQ9NZP8 487 aa9.86□□□□□ -0.83
USP40-210ENST00000454354 SLC7A11Q9UPY5 501 aa9.86□□□□□ -0.83
USP40-210ENST00000454354 EXOGQ9Y2C4 368 aaKnown RBP9.86□□□□□ -0.83
USP40-210ENST00000454354 WNK1Q9H4A3 2382 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 SNTNA6NMZ2 147 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 SLC16A6O15403 523 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 KNG1P01042 644 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 ISG15P05161 165 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 PRDX2P32119 198 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 CCR9P51686 369 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 FUT6P51993 359 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 RAG2P55895 527 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 DLX1P56177 255 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 ACSM1Q08AH1 577 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 BLMHQ13867 455 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 CNN3Q15417 329 aaKnown RBP9.85□□□□□ -0.83
USP40-210ENST00000454354 TMEM244Q5VVB8 128 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 HCP5Q6MZN7 132 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 ANGPTL5Q86XS5 388 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 DNAAF1Q8NEP3 725 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 OR5D13Q8NGL4 314 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 OR4F5Q8NH21 305 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 TRMT10AQ8TBZ6 339 aaKnown RBP9.85□□□□□ -0.83
USP40-210ENST00000454354 C9orf16Q9BUW7 83 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 ADI1Q9BV57 179 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 FAM234AQ9H0X4 552 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 DPAGT1Q9H3H5 408 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 ZNF696Q9H7X3 374 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 S100A14Q9HCY8 104 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 TNFRSF19Q9NS68 423 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 C19orf12Q9NSK7 152 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 FAM96BQ9Y3D0 163 aa9.85□□□□□ -0.83
USP40-210ENST00000454354 FAM230AA0A1W2PPH8 454 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 DAPL1A0PJW8 107 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 H3BSH0 61 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 SPRY1O43609 319 aaPredicted RBP9.84□□□□□ -0.83
USP40-210ENST00000454354 GPR137BO60478 399 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 TK1P04183 234 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 CRYBA1P05813 215 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 OMGP23515 440 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 SAA4P35542 130 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 CEBPDP49716 269 aaPredicted RBP9.84□□□□□ -0.83
USP40-210ENST00000454354 CAPZA1P52907 286 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 OR12D2P58182 307 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 NANOS3P60323 173 aaKnown RBP9.84□□□□□ -0.83
USP40-210ENST00000454354 ACTA2P62736 377 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 RPL31P62899 125 aaKnown RBP9.84□□□□□ -0.83
USP40-210ENST00000454354 ACTG2P63267 376 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 PRB3Q04118 309 aaPredicted RBP9.84□□□□□ -0.83
USP40-210ENST00000454354 ZNF91Q05481 1191 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 GDPGP1Q6ZNW5 385 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 UTS2BQ765I0 119 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 EGFL6Q8IUX8 553 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 ENTHD1Q8IYW4 607 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 FAM185AQ8N0U4 392 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 ACBD7Q8N6N7 88 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 WFDC12Q8WWY7 111 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 LGALS12Q96DT0 336 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 PELI1Q96FA3 418 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 CEP19Q96LK0 163 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 SLC29A1Q99808 456 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 SEBOXQ9HB31 216 aaPredicted RBP9.84□□□□□ -0.83
USP40-210ENST00000454354 BEX1Q9HBH7 125 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 MTCH1Q9NZJ7 389 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 FRRS1LQ9P0K9 344 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 OR14J1Q9UGF5 321 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 GMPPBQ9Y5P6 360 aa9.84□□□□□ -0.83
USP40-210ENST00000454354 KIAA2026Q5HYC2 2103 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 IGKV1-9A0A0C4DH69 117 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 A0A1W2PPH5 198 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 F8VVB4 439 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 F8VWA3 439 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 H0YAE9 185 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 K7N7A8 449 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 EBAG9O00559 213 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 MPZL2O60487 215 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 ZNF737O75373 536 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 SERPINA3P01011 423 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 IGHA1P01876 353 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 HTR1AP08908 422 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 DBTP11182 482 aaKnown RBP9.83□□□□□ -0.84
USP40-210ENST00000454354 TAF9Q16594 264 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 MIDNQ504T8 468 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 OLFML2AQ68BL7 652 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 Q8IYB0 196 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 RDH10Q8IZV5 341 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 BATF2Q8N1L9 274 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 SYS1Q8N2H4 156 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 PQLC1Q8N2U9 271 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 PNKDQ8N490 385 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 C11orf42Q8N5U0 333 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 BEND2Q8NDZ0 799 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 RHOXF1Q8NHV9 184 aa9.83□□□□□ -0.84
USP40-210ENST00000454354 ADAT3Q96EY9 351 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms