RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RFKQ969G6 155 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 UBE2FQ969M7 185 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 PKIBQ9C010 78 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 VPREB3Q9UKI3 123 aa10.19□□□□□ -0.78
CPSF4-208ENST00000452047 IGKV1-27A0A075B6S5 117 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 MEIOCA2RUB1 952 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 H3BSH0 61 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 J3QRE1 110 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 SLC1A7O00341 560 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 EI24O14681 340 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 SYT7O43581 403 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 KIR3DL2P43630 455 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 CAPZA1P52907 286 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
CPSF4-208ENST00000452047 BLMHQ13867 455 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 KPNB1Q14974 876 aaKnown RBP10.18□□□□□ -0.78
CPSF4-208ENST00000452047 SLC25A30Q5SVS4 291 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 GDPGP1Q6ZNW5 385 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 BATF2Q8N1L9 274 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 ZSCAN4Q8NAM6 433 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-208ENST00000452047 OR5D13Q8NGL4 314 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 TRMT10AQ8TBZ6 339 aaKnown RBP10.18□□□□□ -0.78
CPSF4-208ENST00000452047 TRUB1Q8WWH5 349 aaKnown RBP10.18□□□□□ -0.78
CPSF4-208ENST00000452047 AJUBAQ96IF1 538 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 HRASLS5Q96KN8 279 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 CITED1Q99966 193 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 CHST5Q9GZS9 411 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 PLEKHA1Q9HB21 404 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 USE1Q9NZ43 259 aa10.18□□□□□ -0.78
CPSF4-208ENST00000452047 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.18□□□□□ -0.78
CPSF4-208ENST00000452047 LOC107986453A0A1B0GWG9 222 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 F8VVB4 439 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 F8VWA3 439 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 H0YAE9 185 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 ENTPD6O75354 484 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 TK1P04183 234 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 UBCP0CG48 685 aaKnown RBP10.17□□□□□ -0.78
CPSF4-208ENST00000452047 ATP6V1E1P36543 226 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 PROK1P58294 105 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 KRTAP10-3P60369 221 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 MIDNQ504T8 468 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 TP53I3Q53FA7 332 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 TMEM200BQ69YZ2 307 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 TREML4Q6UXN2 200 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 C17orf107Q6ZR85 190 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 Q6ZSV7 163 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 MKXQ8IYA7 352 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 BEND2Q8NDZ0 799 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 CCDC54Q8NEL0 328 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 C17orf50Q8WW18 174 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 C10orf35Q96D05 121 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 FAM234AQ9H0X4 552 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 IMPAD1Q9NX62 359 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 MTCH1Q9NZJ7 389 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 GNG8Q9UK08 70 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 SLC7A11Q9UPY5 501 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 SF3B6Q9Y3B4 125 aaKnown RBP10.17□□□□□ -0.78
CPSF4-208ENST00000452047 RNF114Q9Y508 228 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 WNK1Q9H4A3 2382 aa10.17□□□□□ -0.78
CPSF4-208ENST00000452047 FAM230AA0A1W2PPH8 454 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 BTBD17A6NE02 478 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 K7N7A8 449 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ANGPTL7O43827 346 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ZNF737O75373 536 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 GATBO75879 557 aaKnown RBP10.16□□□□□ -0.78
CPSF4-208ENST00000452047 CLPXO76031 633 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 PAHP00439 452 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 CCL3L1P16619 93 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ALDH3A2P51648 485 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 FUT6P51993 359 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 SNRPGP62308 76 aaKnown RBP10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ACTC1P68032 377 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ACTA1P68133 377 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ZNF273Q14593 569 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 OCLNQ16625 522 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ZFP1Q6P2D0 407 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 FDX2Q6P4F2 183 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 BRICD5Q6PL45 260 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 FAM220AQ7Z4H9 259 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 RDH10Q8IZV5 341 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 OR4M1Q8NGD0 313 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 OR2G2Q8NGZ5 317 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 OR5R1Q8NH85 324 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 PP6455Q8WZ26 134 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 CEP19Q96LK0 163 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 MBOAT4Q96T53 435 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 C16orf95Q9H693 158 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 OR14J1Q9UGF5 321 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 ORC6Q9Y5N6 252 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 NOTCH1P46531 2555 aa10.16□□□□□ -0.78
CPSF4-208ENST00000452047 IGKV1-9A0A0C4DH69 117 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 SLC16A6O15403 523 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 WIPF1O43516 503 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 TSPAN9O75954 239 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 ISG15P05161 165 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 TGFBR2P37173 567 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 DLX6P56179 175 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 NANOS3P60323 173 aaKnown RBP10.15□□□□□ -0.78
CPSF4-208ENST00000452047 ERVFRD-1P60508 538 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms