RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 OR5D13Q8NGL4 314 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 UBE2FQ969M7 185 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 HRASLS5Q96KN8 279 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 NRIP2Q9BQI9 281 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 PKIBQ9C010 78 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 SF3B6Q9Y3B4 125 aaKnown RBP12.52□□□□□ -0.41
CHD3-205ENST00000449744 DAPL1A0PJW8 107 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 H3BNX3 289 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 WIPF1O43516 503 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 ENTPD6O75354 484 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 UBCP0CG48 685 aaKnown RBP12.51□□□□□ -0.41
CHD3-205ENST00000449744 MPZP25189 248 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 SAA4P35542 130 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 FUT6P51993 359 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 RPL31P62899 125 aaKnown RBP12.51□□□□□ -0.41
CHD3-205ENST00000449744 ACSM1Q08AH1 577 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 IL24Q13007 206 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 OLFML2AQ68BL7 652 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 C10orf35Q96D05 121 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 BORCS8Q96FH0 119 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 ZNF696Q9H7X3 374 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 C19orf12Q9NSK7 152 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 ZNRD1Q9P1U0 126 aa12.51□□□□□ -0.41
CHD3-205ENST00000449744 LOC107986453A0A1B0GWG9 222 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 hCG_1809904A0A1W2PP81 198 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 A0A1W2PPE2 198 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 A0A1W2PR64 198 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 A0A1W2PRV1 198 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 CLPSL1A2RUU4 121 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 ANGPTL7O43827 346 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 SNRPGP62308 76 aaKnown RBP12.5□□□□□ -0.41
CHD3-205ENST00000449744 RELBQ01201 579 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
CHD3-205ENST00000449744 UBE2V2Q15819 145 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 OCLNQ16625 522 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 SLC25A30Q5SVS4 291 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 TMEM244Q5VVB8 128 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 KCTD20Q7Z5Y7 419 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 PRSS35Q8N3Z0 413 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 PNKDQ8N490 385 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 CBR4Q8N4T8 237 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 CHST5Q9GZS9 411 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 FAM234AQ9H0X4 552 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 GMPPBQ9Y5P6 360 aa12.5□□□□□ -0.41
CHD3-205ENST00000449744 TK1P04183 234 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 HTR1AP08908 422 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 KIR3DL2P43630 455 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 ISL1P61371 349 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 ERVK11-1P61568 191 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 DHRS7BQ6IAN0 325 aaPredicted RBP12.49□□□□□ -0.41
CHD3-205ENST00000449744 RDH10Q8IZV5 341 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 ASCC1Q8N9N2 400 aaKnown RBP12.49□□□□□ -0.41
CHD3-205ENST00000449744 OR4M1Q8NGD0 313 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 OR2G2Q8NGZ5 317 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 OR5R1Q8NH85 324 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 PP6455Q8WZ26 134 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 MRPL48Q96GC5 212 aaKnown RBP12.49□□□□□ -0.41
CHD3-205ENST00000449744 MYCBPQ99417 103 aaPredicted RBP12.49□□□□□ -0.41
CHD3-205ENST00000449744 C9orf16Q9BUW7 83 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 HEXA-AS1Q9H8Q6 139 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 VPREB3Q9UKI3 123 aa12.49□□□□□ -0.41
CHD3-205ENST00000449744 SLC16A6O15403 523 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 INMTO95050 263 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 CYB5AP00167 134 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 CHRM2P08172 466 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 OCM2P0CE71 109 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 OCMP0CE72 109 aaPredicted RBP12.48□□□□□ -0.41
CHD3-205ENST00000449744 ZNF20P17024 532 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 ATP1B3P54709 279 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 COL10A1Q03692 680 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 TAF9Q16594 264 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 MIDNQ504T8 468 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 TMEM200BQ69YZ2 307 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 SLC25A26Q70HW3 274 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 EGFL6Q8IUX8 553 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 ACBD7Q8N6N7 88 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 WFDC12Q8WWY7 111 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 MTCH1Q9NZJ7 389 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 RNF114Q9Y508 228 aa12.48□□□□□ -0.41
CHD3-205ENST00000449744 IGKV1-27A0A075B6S5 117 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 J3QLW9 94 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 EBAG9O00559 213 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 MPZL2O60487 215 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
CHD3-205ENST00000449744 ZNF19P17023 458 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 PRKACBP22694 351 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 RBP2P50120 134 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 OR12D2P58182 307 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 ERVFRD-1P60508 538 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 ACTA2P62736 377 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 ACTG2P63267 376 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms