RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TGFBR3Q03167 851 aa10.96□□□□□ -0.65
UBE3B-204ENST00000449510 EIF4E3Q8N5X7 224 aaKnown RBP10.96□□□□□ -0.65
UBE3B-204ENST00000449510 CCDC54Q8NEL0 328 aa10.96□□□□□ -0.65
UBE3B-204ENST00000449510 LHX4Q969G2 390 aa10.96□□□□□ -0.65
UBE3B-204ENST00000449510 ZNF799Q96GE5 643 aa10.96□□□□□ -0.65
UBE3B-204ENST00000449510 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
UBE3B-204ENST00000449510 R4GN57 208 aa10.96□□□□□ -0.65
UBE3B-204ENST00000449510 PLRG1O43660 514 aaKnown RBP10.96□□□□□ -0.66
UBE3B-204ENST00000449510 IFNA1P01562 189 aa10.96□□□□□ -0.66
UBE3B-204ENST00000449510 CD79AP11912 226 aa10.96□□□□□ -0.66
UBE3B-204ENST00000449510 CARD18P57730 90 aa10.96□□□□□ -0.66
UBE3B-204ENST00000449510 H3F3AP84243 136 aa10.96□□□□□ -0.66
UBE3B-204ENST00000449510 UNC119Q13432 240 aa10.96□□□□□ -0.66
UBE3B-204ENST00000449510 SLC25A26Q70HW3 274 aa10.96□□□□□ -0.66
UBE3B-204ENST00000449510 DOK3Q7L591 496 aa10.96□□□□□ -0.66
UBE3B-204ENST00000449510 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 DVL1O14640 695 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 MSX1P28360 303 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 TMEM41BQ5BJD5 291 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 OR5AS1Q8N127 324 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 PLPPR2Q96GM1 343 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 LPAR5Q9H1C0 372 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 WNT16Q9UBV4 365 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 OR14J1Q9UGF5 321 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 GPR132Q9UNW8 380 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 PLCE1Q9P212 2302 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 LOC285556D6RIA3 1793 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 TRAV39A0A0B4J263 110 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 PQLC2LA1A4F0 135 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 LYPD3O95274 346 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 RPS2P15880 293 aaKnown RBP10.95□□□□□ -0.66
UBE3B-204ENST00000449510 TBPP20226 339 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 UBE2G2P60604 165 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 FHL5Q5TD97 284 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 GFI1BQ5VTD9 330 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 ZNF787Q6DD87 383 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 OR2C3Q8N628 320 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 FAM234AQ9H0X4 552 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 PPP1R3CQ9UQK1 317 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 SPTBN1Q01082 2364 aaKnown RBP10.95□□□□□ -0.66
UBE3B-204ENST00000449510 IGKV1D-43A0A0B4J1Z2 117 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 A0A1W2PNV4 684 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 TGFBR3LH3BV60 316 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 ADAM20O43506 726 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 FOXS1O43638 330 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 SPINK4O60575 86 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 RAMP1O60894 148 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 TUSC2O75896 110 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 HKR1P10072 659 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 SULT1A2P50226 295 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 PMS2P11Q13670 270 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 CSRP2Q16527 193 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 IZUMO4Q1ZYL8 232 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 OR56B2PQ8NGI1 322 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 ABHD14AQ9BUJ0 271 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 GCM1Q9NP62 436 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 CA14Q9ULX7 337 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 VWA8A3KMH1 1905 aa10.95□□□□□ -0.66
UBE3B-204ENST00000449510 PATJQ8NI35 1801 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 COLCA2A8K830 154 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 NDUFA2O43678 99 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 EIF4E2O60573 245 aaKnown RBP10.94□□□□□ -0.66
UBE3B-204ENST00000449510 ABHD16AO95870 558 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 PGA4P0DJD7 388 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 PGA5P0DJD9 388 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 RAB1AP62820 205 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 ZNF154Q13106 437 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 ZNF385CQ66K41 422 aaPredicted RBP10.94□□□□□ -0.66
UBE3B-204ENST00000449510 C1QL2Q7Z5L3 287 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 HOGA1Q86XE5 327 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 CDH23Q9H251 3354 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 METTL15P1P0C7V9 234 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 CALCRP30988 508 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 CHRNA7P36544 502 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 UBE2V2Q15819 145 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 LFNGQ8NES3 379 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 OR4F5Q8NH21 305 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 LIPHQ8WWY8 451 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 CYYR1Q96J86 154 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 TOX2Q96NM4 488 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 FAM103A1Q9BTL3 118 aaKnown RBP10.94□□□□□ -0.66
UBE3B-204ENST00000449510 RTN4RQ9BZR6 473 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 IL17BQ9UHF5 180 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 RALGAPA2Q2PPJ7 1873 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 FIGNL2A6NMB9 653 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 DUX1O43812 170 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 RPS4Y1P22090 263 aaKnown RBP10.94□□□□□ -0.66
UBE3B-204ENST00000449510 ATP6V0CP27449 155 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 CD200P41217 278 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 SCAND1P57086 179 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 FOXK1P85037 733 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 ZNF813Q6ZN06 617 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 BIVMQ86UB2 503 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 PLXDC1Q8IUK5 500 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 GJC3Q8NFK1 279 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 ADAMTS17Q8TE56 1095 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 ALKBH3Q96Q83 286 aaPredicted RBP10.94□□□□□ -0.66
UBE3B-204ENST00000449510 DNAJB11Q9UBS4 358 aa10.94□□□□□ -0.66
UBE3B-204ENST00000449510 OSGIN2Q9Y236 505 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms