RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ST3GAL4Q11206 333 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 CDK5R1Q15078 307 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 LRRC10Q5BKY1 277 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 ANGPTL5Q86XS5 388 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 CALHM1Q8IU99 346 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 OR13C9Q8NGT0 318 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
USP39-206ENST00000448971 GGHQ92820 318 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 PKIBQ9C010 78 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 DNTTIP1Q9H147 329 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 CNOT2Q9NZN8 540 aaKnown RBP12.08□□□□□ -0.48
USP39-206ENST00000448971 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 H0YJX3 145 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 TNFRSF13BO14836 293 aaPredicted RBP12.07□□□□□ -0.48
USP39-206ENST00000448971 RGS9O75916 674 aaPredicted RBP12.07□□□□□ -0.48
USP39-206ENST00000448971 RPSAP08865 295 aaKnown RBP12.07□□□□□ -0.48
USP39-206ENST00000448971 PGA5P0DJD9 388 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 SELLP14151 372 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 ATF1P18846 271 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 PRKACBP22694 351 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 MPZP25189 248 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 RBP2P50120 134 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 ATP1B3P54709 279 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 ACTG1P63261 375 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 PAX2Q02962 417 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 IL24Q13007 206 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 CCDC58Q4VC31 144 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 XAF1Q6GPH4 301 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 IZUMO2Q6UXV1 221 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 ACP7Q6ZNF0 438 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 LHFPL2Q6ZUX7 228 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 UTS2BQ765I0 119 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 BTN2A1Q7KYR7 527 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 BPIFB2Q8N4F0 458 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 TMEM185AQ8NFB2 350 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 OR52N1Q8NH53 320 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 FBLIM1Q8WUP2 373 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 H1FXQ92522 213 aaKnown RBP12.07□□□□□ -0.48
USP39-206ENST00000448971 SPSB1Q96BD6 273 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 OPALINQ96PE5 141 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 GAFA1Q96PS6 74 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 NEK6Q9HC98 313 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 RASL12Q9NYN1 266 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 CLEC2DQ9UHP7 191 aa12.07□□□□□ -0.48
USP39-206ENST00000448971 IGKV1-27A0A075B6S5 117 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 KIR2DS1A0A191URI9 304 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 INMTO95050 263 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 ATP6V1G2O95670 118 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 ECDO95905 644 aaPredicted RBP12.06□□□□□ -0.48
USP39-206ENST00000448971 CYB5AP00167 134 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 NDUFB7P17568 137 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 CAPZA1P52907 286 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 PAX8Q06710 450 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 RPL22L1Q6P5R6 122 aaKnown RBP12.06□□□□□ -0.48
USP39-206ENST00000448971 ZNF788Q6ZQV5 615 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 SLC25A26Q70HW3 274 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 PNLDC1Q8NA58 520 aaKnown RBP12.06□□□□□ -0.48
USP39-206ENST00000448971 DNAAF1Q8NEP3 725 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 ANGPTL6Q8NI99 470 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 GATAD2BQ8WXI9 593 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 SLAMF9Q96A28 289 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 DACT3Q96B18 629 aaPredicted RBP12.06□□□□□ -0.48
USP39-206ENST00000448971 MED30Q96HR3 178 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 CEP19Q96LK0 163 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 NRIP2Q9BQI9 281 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 SLC25A10Q9UBX3 287 aaPredicted RBP12.06□□□□□ -0.48
USP39-206ENST00000448971 OR14J1Q9UGF5 321 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 PSORS1C1Q9UIG5 152 aa12.06□□□□□ -0.48
USP39-206ENST00000448971 IGKV1D-17A0A075B6S4 117 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 IGHV3OR16-10A0A075B7F0 116 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 IGKV1-9A0A0C4DH69 117 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 TRIM77I1YAP6 450 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 SLC1A7O00341 560 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 SIGLEC5O15389 551 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 FSHBP01225 129 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 CD2P06729 351 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 HCKP08631 526 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 PSG2P11465 335 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 AMY2BP19961 511 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 SOX2P48431 317 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 HSPA13P48723 471 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 CEBPDP49716 269 aaPredicted RBP12.05□□□□□ -0.48
USP39-206ENST00000448971 MTCP1P56278 107 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 FGF12P61328 243 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 DGUOKQ16854 277 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 OXLD1Q5BKU9 147 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 ATPAF1Q5TC12 328 aaPredicted RBP12.05□□□□□ -0.48
USP39-206ENST00000448971 METTL11BQ5VVY1 283 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 GPR148Q8TDV2 347 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 RFT1Q96AA3 541 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 SMIM19Q96E16 107 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 SLC6A7Q99884 636 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 ZCCHC4Q9H5U6 513 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 PLCXD1Q9NUJ7 323 aa12.05□□□□□ -0.48
USP39-206ENST00000448971 BABAM2Q9NXR7 383 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms