RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LHFPL4Q7Z7J7 247 aa22.94■■□□□ 1.26
CBX4-202ENST00000448310 ANGPTL5Q86XS5 388 aa22.94■■□□□ 1.26
CBX4-202ENST00000448310 CALHM1Q8IU99 346 aa22.94■■□□□ 1.26
CBX4-202ENST00000448310 KLHDC1Q8N7A1 406 aa22.94■■□□□ 1.26
CBX4-202ENST00000448310 HES4Q9HCC6 221 aa22.94■■□□□ 1.26
CBX4-202ENST00000448310 MRM2Q9UI43 246 aaKnown RBP22.94■■□□□ 1.26
CBX4-202ENST00000448310 SLC22A13Q9Y226 551 aa22.94■■□□□ 1.26
CBX4-202ENST00000448310 MEX3AA1L020 520 aaKnown RBP22.93■■□□□ 1.26
CBX4-202ENST00000448310 TK1P04183 234 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 LGALS4P56470 323 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 AANATQ16613 207 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 PLA1AQ53H76 456 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 AADACL4Q5VUY2 407 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 OR2T6Q8NHC8 308 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 TRMT10AQ8TBZ6 339 aaKnown RBP22.93■■□□□ 1.26
CBX4-202ENST00000448310 PIFOQ8TCI5 191 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 UTP4Q969X6 686 aaKnown RBP22.93■■□□□ 1.26
CBX4-202ENST00000448310 SLC7A6OSQ96CW6 309 aaPredicted RBP22.93■■□□□ 1.26
CBX4-202ENST00000448310 PRRG3Q9BZD7 231 aa22.93■■□□□ 1.26
CBX4-202ENST00000448310 H2AFY2Q9P0M6 372 aaPredicted RBP22.93■■□□□ 1.26
CBX4-202ENST00000448310 ZNF670-ZNF695F2Z2N8 137 aa22.92■■□□□ 1.26
CBX4-202ENST00000448310 H3BSH0 61 aa22.92■■□□□ 1.26
CBX4-202ENST00000448310 ODF4Q2M2E3 257 aa22.92■■□□□ 1.26
CBX4-202ENST00000448310 DYNAPQ8N1N2 210 aa22.92■■□□□ 1.26
CBX4-202ENST00000448310 NKX3-1Q99801 234 aaPredicted RBP22.92■■□□□ 1.26
CBX4-202ENST00000448310 RANBP3Q9H6Z4 567 aaPredicted RBP22.92■■□□□ 1.26
CBX4-202ENST00000448310 RAB18Q9NP72 206 aa22.92■■□□□ 1.26
CBX4-202ENST00000448310 KRT84Q9NSB2 600 aa22.92■■□□□ 1.26
CBX4-202ENST00000448310 SNX5Q9Y5X3 404 aa22.92■■□□□ 1.26
CBX4-202ENST00000448310 hCG_1809904A0A1W2PP81 198 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 A0A1W2PPE2 198 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 A0A1W2PR64 198 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 A0A1W2PRV1 198 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 RPP14O95059 124 aaKnown RBP22.91■■□□□ 1.26
CBX4-202ENST00000448310 MPZP25189 248 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 EFNB1P98172 346 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 SLX4IPQ5VYV7 408 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 NXNL2Q5VZ03 156 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 SSX6Q7RTT6 188 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 TMEM163Q8TC26 289 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 IL4I1Q96RQ9 567 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 TBX5Q99593 518 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 CLN6Q9NWW5 311 aa22.91■■□□□ 1.26
CBX4-202ENST00000448310 G3V4G9 280 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 VSIG10L2P0DP72 767 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 DLX6P56179 175 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 ACTR3P61158 418 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 ERVK11-1P61568 191 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 COL10A1Q03692 680 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 C12orf73Q69YU5 71 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 ASCC1Q8N9N2 400 aaKnown RBP22.9■■□□□ 1.26
CBX4-202ENST00000448310 CFHR4Q92496 578 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 MNTQ99583 582 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 NPFFR1Q9GZQ6 430 aa22.9■■□□□ 1.26
CBX4-202ENST00000448310 FAM230AA0A1W2PPH8 454 aa22.89■■□□□ 1.25
CBX4-202ENST00000448310 ZAR1LA6NP61 321 aa22.89■■□□□ 1.25
CBX4-202ENST00000448310 DNAJC8O75937 253 aaPredicted RBP22.89■■□□□ 1.25
CBX4-202ENST00000448310 RAB13P51153 203 aa22.89■■□□□ 1.25
CBX4-202ENST00000448310 C11orf88Q6PI97 169 aa22.89■■□□□ 1.25
CBX4-202ENST00000448310 Q6ZSR3 168 aa22.89■■□□□ 1.25
CBX4-202ENST00000448310 C17orf98A8MV24 154 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 F8VVB4 439 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 F8VWA3 439 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 K7N7A8 449 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 INMTO95050 263 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 IL24Q13007 206 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 HABP2Q14520 560 aaPredicted RBP22.88■■□□□ 1.25
CBX4-202ENST00000448310 LYG1Q8N1E2 194 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 YIPF7Q8N8F6 280 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 CADM1Q9BY67 442 aaKnown RBP22.88■■□□□ 1.25
CBX4-202ENST00000448310 PKIBQ9C010 78 aa22.88■■□□□ 1.25
CBX4-202ENST00000448310 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.88■■□□□ 1.252e-6■■■□□ 16.5
CBX4-202ENST00000448310 FAM90A8PA6NJQ4 464 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 DHRS7CA6NNS2 312 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 APOL3O95236 402 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 ARG1P05089 322 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 CCL1P22362 96 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 EDDM3BP56851 147 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 LIAT1Q6ZQX7 453 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 ZNF702PQ9H963 129 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 PLEKHA1Q9HB21 404 aa22.87■■□□□ 1.25
CBX4-202ENST00000448310 ZNF737O75373 536 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 OPN1MWP04001 364 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 KRT8P05787 483 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 OPN1MW2P0DN77 364 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 OPN1MW3P0DN78 364 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 UBE2V2Q15819 145 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 FAM189A2Q15884 450 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 BEAN1Q3B7T3 259 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 LDLRAD2Q5SZI1 272 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 CCBE1Q6UXH8 406 aaPredicted RBP22.86■■□□□ 1.25
CBX4-202ENST00000448310 GID4Q8IVV7 300 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 SLAMF9Q96A28 289 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 MTCH1Q9NZJ7 389 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 SLC7A11Q9UPY5 501 aa22.86■■□□□ 1.25
CBX4-202ENST00000448310 IGKV1-27A0A075B6S5 117 aa22.85■■□□□ 1.25
CBX4-202ENST00000448310 G3V2T6 193 aa22.85■■□□□ 1.25
CBX4-202ENST00000448310 ATP6AP1Q15904 470 aa22.85■■□□□ 1.25
CBX4-202ENST00000448310 KDM4DQ6B0I6 523 aa22.85■■□□□ 1.25
CBX4-202ENST00000448310 CATSPERDQ86XM0 798 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms