RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 DEFB126Q9BYW3 111 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 LUZP4Q9P127 313 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 CABIN1Q9Y6J0 2220 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 EYSQ5T1H1 3165 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 MED12Q93074 2177 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 H7C1Q1 480 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 TP53I11O14683 189 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 GPR137BO60478 399 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 EIF1BO60739 113 aaKnown RBP16.63■□□□□ 0.25
SDCBP-204ENST00000447182 SCGB1D2O95969 90 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 ZNF728P0DKX0 622 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 MTCP1P56278 107 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 SNRPEP62304 92 aaKnown RBP16.63■□□□□ 0.25
SDCBP-204ENST00000447182 SHBQ15464 509 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 SLC39A7Q92504 469 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 SGK3Q96BR1 496 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 TAAR9Q96RI9 348 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 FAAP24Q9BTP7 215 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 RPS10P5Q9NQ39 176 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 AK3Q9UIJ7 227 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 RTTNQ86VV8 2226 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 MASP2O00187 686 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 S100A8P05109 93 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 LMO1P25800 156 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 RAB5CP51148 216 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 LBX1P52954 281 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 GUK1Q16774 197 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 LRRC18Q8N456 261 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 ZNF561Q8N587 486 aa16.63■□□□□ 0.25
SDCBP-204ENST00000447182 RTN4IP1Q8WWV3 396 aaPredicted RBP16.63■□□□□ 0.25
SDCBP-204ENST00000447182 ZNF385AQ96PM9 386 aaKnown RBP16.63■□□□□ 0.25
SDCBP-204ENST00000447182 FOXD3Q9UJU5 478 aaPredicted RBP16.63■□□□□ 0.25
SDCBP-204ENST00000447182 MYO15AQ9UKN7 3530 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 ZNF850A8MQ14 1090 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 UBE2CO00762 179 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 DBHP09172 617 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 OR5AC1P0C628 307 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 ZNF44P15621 663 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 AGAP20933 346 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 AFF3P51826 1226 aaKnown RBP16.62■□□□□ 0.25
SDCBP-204ENST00000447182 SNAI3Q3KNW1 292 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 AWAT1Q58HT5 328 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 ASCL4Q6XD76 172 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 DNASE2BQ8WZ79 361 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 BSCL2Q96G97 398 aaPredicted RBP16.62■□□□□ 0.25
SDCBP-204ENST00000447182 C18orf12Q96KH6 178 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 ANGPTL4Q9BY76 406 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 WFDC1Q9HC57 220 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 GPR173Q9NS66 373 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 PLEK2Q9NYT0 353 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 RARRES3Q9UL19 164 aa16.62■□□□□ 0.25
SDCBP-204ENST00000447182 C7orf77A4D0Y5 90 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 SMIM6P0DI80 62 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 CHATP28329 748 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 IL13RA2Q14627 380 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 RSU1Q15404 277 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 ABCA11PQ4W5N1 156 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 PRAMEF20Q5VT98 475 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 LIAT1Q6ZQX7 453 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 INTS12Q96CB8 462 aaKnown RBP16.61■□□□□ 0.25
SDCBP-204ENST00000447182 RGCCQ9H4X1 137 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 STRAPQ9Y3F4 350 aaKnown RBP16.61■□□□□ 0.25
SDCBP-204ENST00000447182 SPEGQ15772 3267 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 NPIPA2E9PIF3 369 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 NPIPA3F8WFD2 350 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 BCAT2O15382 392 aaPredicted RBP16.61■□□□□ 0.25
SDCBP-204ENST00000447182 NME2P1O60361 137 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 CYC1P08574 325 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 CRYGSP22914 178 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 ACKR3P25106 362 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 RRADP55042 308 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 TAF9Q16594 264 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 FAM27BQ5VT28 67 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 TOMM40LQ969M1 308 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 RBM24Q9BX46 236 aaKnown RBP16.61■□□□□ 0.25
SDCBP-204ENST00000447182 PARP12Q9H0J9 701 aaKnown RBP16.61■□□□□ 0.25
SDCBP-204ENST00000447182 EML6Q6ZMW3 1958 aa16.61■□□□□ 0.25
SDCBP-204ENST00000447182 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 TERTO14746 1132 aaKnown RBP16.6■□□□□ 0.25
SDCBP-204ENST00000447182 DUSP1P28562 367 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 TSC22D1Q15714 1073 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 EIF2S3LQ2VIR3 472 aaKnown RBP16.6■□□□□ 0.25
SDCBP-204ENST00000447182 SP6Q3SY56 376 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 AKIRIN2Q53H80 203 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 LYZL2Q7Z4W2 148 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 TMEM156Q8N614 296 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 HPSE2Q8WWQ2 592 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 FBXO17Q96EF6 278 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 NAA11Q9BSU3 229 aaPredicted RBP16.6■□□□□ 0.25
SDCBP-204ENST00000447182 OPRM1P35372 400 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 CAMLGP49069 296 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 MRPS34P82930 218 aaKnown RBP16.6■□□□□ 0.25
SDCBP-204ENST00000447182 ZNF616Q08AN1 781 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 CNN3Q15417 329 aaKnown RBP16.6■□□□□ 0.25
SDCBP-204ENST00000447182 MSI2Q96DH6 328 aaKnown RBP16.6■□□□□ 0.25
SDCBP-204ENST00000447182 SLC2A9Q9NRM0 540 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 C19orf12Q9NSK7 152 aa16.6■□□□□ 0.25
SDCBP-204ENST00000447182 IGKV1-27A0A075B6S5 117 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 ANGPTL7O43827 346 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 PNLIPP16233 465 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms