RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 GNRHR2Q96P88 292 aa12.43□□□□□ -0.42
ERCC3-203ENST00000445889 RARRES2Q99969 163 aa12.43□□□□□ -0.42
ERCC3-203ENST00000445889 PIGQQ9BRB3 760 aa12.43□□□□□ -0.42
ERCC3-203ENST00000445889 CA14Q9ULX7 337 aa12.43□□□□□ -0.42
ERCC3-203ENST00000445889 UBE2CO00762 179 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 FOLR2P14207 255 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 CD27P26842 260 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 THBS4P35443 961 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 HNRNPKP61978 463 aaKnown RBP eCLIP12.42□□□□□ -0.42
ERCC3-203ENST00000445889 MEX3BQ6ZN04 569 aaKnown RBP12.42□□□□□ -0.42
ERCC3-203ENST00000445889 SLC25A45Q8N413 288 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 FAM89BQ8N5H3 189 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 NFAM1Q8NET5 270 aaPredicted RBP12.42□□□□□ -0.42
ERCC3-203ENST00000445889 OR6C1Q96RD1 312 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 ZNF251Q9BRH9 671 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 FAM212BQ9NTI7 297 aaPredicted RBP12.42□□□□□ -0.42
ERCC3-203ENST00000445889 PLEK2Q9NYT0 353 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 PUS1Q9Y606 427 aaKnown RBP eCLIP12.42□□□□□ -0.42
ERCC3-203ENST00000445889 FAM186AA6NE01 2351 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 ADAMTS9Q9P2N4 1935 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 SMIM6P0DI80 62 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 PPP1CCP36873 323 aaKnown RBP12.42□□□□□ -0.42
ERCC3-203ENST00000445889 PTGDSP41222 190 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 CLINT1Q14677 625 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 AKR7LQ8NHP1 331 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 BCL2L14Q9BZR8 327 aa12.42□□□□□ -0.42
ERCC3-203ENST00000445889 DUX1O43812 170 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 RAB5AP20339 215 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-203ENST00000445889 PIGYQ3MUY2 71 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 NKAIN1Q4KMZ8 207 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 RPUSD3Q6P087 351 aaKnown RBP12.41□□□□□ -0.42
ERCC3-203ENST00000445889 C17orf82Q86X59 251 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-203ENST00000445889 SLAMF9Q96A28 289 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 EGLN1Q9GZT9 426 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 WNT16Q9UBV4 365 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 AK3Q9UIJ7 227 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 S100A8P05109 93 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 AGAP20933 346 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 GLP1RP43220 463 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 SULT1A1P50225 295 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 TMEM182Q6ZP80 229 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-203ENST00000445889 WDSUB1Q8N9V3 476 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 STARD10Q9Y365 291 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 EIF1BO60739 113 aaKnown RBP12.41□□□□□ -0.42
ERCC3-203ENST00000445889 CLN5O75503 358 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 PIAS2O75928 621 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 OR8U8P0C7N1 319 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 EIF1P41567 113 aaKnown RBP12.41□□□□□ -0.42
ERCC3-203ENST00000445889 ACER2Q5QJU3 275 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 OPN5Q6U736 354 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 ZNF565Q8N9K5 539 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 PLPP5Q8NEB5 264 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 RTN4IP1Q8WWV3 396 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-203ENST00000445889 MYOTQ9UBF9 498 aa12.41□□□□□ -0.42
ERCC3-203ENST00000445889 COL6A3P12111 3177 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 ZNF727A8MUV8 499 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 CCL20P78556 96 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 FAM3AP98173 230 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 ABCA11PQ4W5N1 156 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 FAM213BQ8TBF2 198 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 RHBDD1Q8TEB9 315 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 MRGPRX4Q96LA9 322 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 MOB1AQ9H8S9 216 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 ANXA10Q9UJ72 324 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 CCDC187A0A096LP49 1063 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 A0A1W2PNV4 684 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 FOXI3A8MTJ6 420 aaPredicted RBP12.4□□□□□ -0.42
ERCC3-203ENST00000445889 GEMIN2O14893 280 aaKnown RBP12.4□□□□□ -0.42
ERCC3-203ENST00000445889 FBP1P09467 338 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 LBX1P52954 281 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 ZNF574Q6ZN55 896 aaPredicted RBP12.4□□□□□ -0.42
ERCC3-203ENST00000445889 OR6X1Q8NH79 312 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 EDARADDQ8WWZ3 215 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 OXGR1Q96P68 337 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 UCK1Q9HA47 277 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 KCNJ16Q9NPI9 418 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 FSCN3Q9NQT6 498 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 URGCP-MRPS24S4R325 110 aa12.4□□□□□ -0.42
ERCC3-203ENST00000445889 EML6Q6ZMW3 1958 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 IGKV1-27A0A075B6S5 117 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 DHRS3O75911 302 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 YIF1AO95070 293 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 ONECUT2O95948 504 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 LINC00469Q8N7U9 141 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 MAGT1Q9H0U3 335 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 C19orf12Q9NSK7 152 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 MMP24Q9Y5R2 645 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 CRYM-AS1A6NIL9 109 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 M0R135 149 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 TNFSF12O43508 249 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
ERCC3-203ENST00000445889 DANCRP0C864 163 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 JMJD7P0C870 316 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 CSNK1A1P48729 337 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms