RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 METAP1DQ6UB28 335 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-203ENST00000444440 RNF144BQ7Z419 303 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 LDLRAD3Q86YD5 345 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 RDH10Q8IZV5 341 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 DHRSXQ8N5I4 330 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 SETD9Q8NE22 299 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 TMEM185AQ8NFB2 350 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 ZNF671Q8TAW3 534 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 C17orf50Q8WW18 174 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 MED30Q96HR3 178 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 AJUBAQ96IF1 538 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 NRIP2Q9BQI9 281 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 VCXQ9H320 206 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 DCLRE1BQ9H816 532 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 HES4Q9HCC6 221 aa8.9□□□□□ -0.98
SF3A1-203ENST00000444440 EXOGQ9Y2C4 368 aaKnown RBP8.9□□□□□ -0.98
SF3A1-203ENST00000444440 VWFP04275 2813 aa8.9□□□□□ -0.99
SF3A1-203ENST00000444440 LOC107986453A0A1B0GWG9 222 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 IRGMA1A4Y4 181 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 DLGAP1O14490 977 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 GPR37O15354 613 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 NOS1APO75052 506 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-203ENST00000444440 SERPINA3P01011 423 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 RPSAP08865 295 aaKnown RBP8.89□□□□□ -0.99
SF3A1-203ENST00000444440 DBTP11182 482 aaKnown RBP8.89□□□□□ -0.99
SF3A1-203ENST00000444440 GABRB1P18505 474 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 MPZP25189 248 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 IER3P46695 156 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 NANOS3P60323 173 aaKnown RBP8.89□□□□□ -0.99
SF3A1-203ENST00000444440 ERVK11-1P61568 191 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 ACTA2P62736 377 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 ACTG2P63267 376 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 RAB40BQ12829 278 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 TAF9Q16594 264 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 LPCAT4Q643R3 524 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 ENTHD1Q8IYW4 607 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 C11orf42Q8N5U0 333 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 OR10AC1Q8NH08 325 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 CYGBQ8WWM9 190 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 LGALS12Q96DT0 336 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 INPP5EQ9NRR6 644 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 MTCH1Q9NZJ7 389 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 ZNRD1Q9P1U0 126 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 IL36RNQ9UBH0 155 aa8.89□□□□□ -0.99
SF3A1-203ENST00000444440 PRKDCP78527 4128 aaKnown RBP8.89□□□□□ -0.99
SF3A1-203ENST00000444440 FAM230AA0A1W2PPH8 454 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 A0A1W2PQ09 198 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 MEX3AA1L020 520 aaKnown RBP8.88□□□□□ -0.99
SF3A1-203ENST00000444440 MEGF11A6BM72 1044 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 ANKRD61A6NGH8 418 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 ANKRD65E5RJM6 399 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 J3QLW9 94 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 NPFFO15130 113 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 SYT7O43581 403 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 GPR137BO60478 399 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 INMTO95050 263 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 HTR1AP08908 422 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 UBCP0CG48 685 aaKnown RBP8.88□□□□□ -0.99
SF3A1-203ENST00000444440 CCL3L1P16619 93 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 ZNF19P17023 458 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 PRDX2P32119 198 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 SAA4P35542 130 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 OR12D2P58182 307 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 IL18R1Q13478 541 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 GALEQ14376 348 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 ZNF273Q14593 569 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 TMEM244Q5VVB8 128 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 ZNF573Q86YE8 665 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 MKXQ8IYA7 352 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 FAM185AQ8N0U4 392 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 TMEM86BQ8N661 226 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 OR4M1Q8NGD0 313 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 HAVCR2Q8TDQ0 301 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 ADAT3Q96EY9 351 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-203ENST00000444440 DMRTB1Q96MA1 342 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 PLEKHA1Q9HB21 404 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 MRPS18AQ9NVS2 196 aaKnown RBP8.88□□□□□ -0.99
SF3A1-203ENST00000444440 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 OR14J1Q9UGF5 321 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 SLC7A11Q9UPY5 501 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 POMT1Q9Y6A1 747 aa8.88□□□□□ -0.99
SF3A1-203ENST00000444440 TET2Q6N021 2002 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-203ENST00000444440 WNK1Q9H4A3 2382 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 IGKV1-9A0A0C4DH69 117 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 M0R1W7 72 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 SPRY1O43609 319 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-203ENST00000444440 NXPH2O95156 264 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 PEX2P28328 305 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 RAG2P55895 527 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 ZNF91Q05481 1191 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 IL24Q13007 206 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 MRPL28Q13084 256 aaKnown RBP8.87□□□□□ -0.99
SF3A1-203ENST00000444440 MED21Q13503 144 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 SMIM21Q3B7S5 101 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 TMEM200BQ69YZ2 307 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 FDX2Q6P4F2 183 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 CRIP3Q6Q6R5 217 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 SHISA2Q6UWI4 295 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 TCF23Q7RTU1 214 aa8.87□□□□□ -0.99
SF3A1-203ENST00000444440 LHFPL3Q86UP9 236 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms