RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 MEF2CQ06413 473 aaPredicted RBP11.18□□□□□ -0.62
PTPRE-203ENST00000442830 FAM189A2Q15884 450 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 MINOS1Q5TGZ0 78 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 Q8IYB0 196 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 BBS1Q8NFJ9 593 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 NKX3-1Q99801 234 aaPredicted RBP11.18□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF702PQ9H963 129 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 PLEKHA1Q9HB21 404 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 NECAP2Q9NVZ3 263 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 TVP23BQ9NYZ1 205 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 H2AFY2Q9P0M6 372 aaPredicted RBP11.18□□□□□ -0.62
PTPRE-203ENST00000442830 ENOPH1Q9UHY7 261 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 SNX5Q9Y5X3 404 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 R4GMQ9 66 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 MINOS1-NBL1R4GNA1 71 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 V9GYS6 101 aa11.18□□□□□ -0.62
PTPRE-203ENST00000442830 MEGF11A6BM72 1044 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ODF3BA8MYP8 253 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 GATBO75879 557 aaKnown RBP11.17□□□□□ -0.62
PTPRE-203ENST00000442830 DNAJC8O75937 253 aaPredicted RBP11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ALX3O95076 343 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 TTRP02766 147 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ARG1P05089 322 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF728P0DKX0 622 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 COX7A1P24310 79 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ARHGDIBP52566 201 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 IL18R1Q13478 541 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 Q6ZSR3 168 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 GDPD3Q7L5L3 318 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 C16orf82Q7Z2V1 217 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ENTHD1Q8IYW4 607 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 ELMOD2Q8IZ81 293 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 C11orf42Q8N5U0 333 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 OR11H6Q8NGC7 330 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 CANT1Q8WVQ1 401 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 C10orf35Q96D05 121 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 AKR1E2Q96JD6 320 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 SEBOXQ9HB31 216 aaPredicted RBP11.17□□□□□ -0.62
PTPRE-203ENST00000442830 PAPOLBQ9NRJ5 636 aaKnown RBP11.17□□□□□ -0.62
PTPRE-203ENST00000442830 OR14J1Q9UGF5 321 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 GTF2A1LQ9UNN4 478 aa11.17□□□□□ -0.62
PTPRE-203ENST00000442830 hADV38S2A0JD32 116 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 CCDC182A6NF36 153 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF670-ZNF695F2Z2N8 137 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 PSMD9O00233 223 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 F2RL2O00254 374 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 SYNGR1O43759 233 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 CHST1O43916 411 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 MRPL3P09001 348 aaKnown RBP11.16□□□□□ -0.62
PTPRE-203ENST00000442830 CCL3L1P16619 93 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 CRISP1P54107 249 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 LOXL3P58215 753 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF273Q14593 569 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 SLX4IPQ5VYV7 408 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 NXNL2Q5VZ03 156 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF322Q6U7Q0 402 aaPredicted RBP11.16□□□□□ -0.62
PTPRE-203ENST00000442830 ASRGL1Q7L266 308 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 MEPCEQ7L2J0 689 aaKnown RBP11.16□□□□□ -0.62
PTPRE-203ENST00000442830 GID4Q8IVV7 300 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 ASCC1Q8N9N2 400 aaKnown RBP11.16□□□□□ -0.62
PTPRE-203ENST00000442830 OR4M1Q8NGD0 313 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 PIFOQ8TCI5 191 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF714Q96N38 554 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 SERTAD4Q9NUC0 356 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 GLS2Q9UI32 602 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 OR52A1Q9UKL2 312 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 SLC22A13Q9Y226 551 aa11.16□□□□□ -0.62
PTPRE-203ENST00000442830 A6NDX4 124 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 SERPINA3P01011 423 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 CCL1P22362 96 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 VDAC2P45880 294 aaPredicted RBP11.15□□□□□ -0.62
PTPRE-203ENST00000442830 HCCSP53701 268 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 DLX6P56179 175 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 EDDM3BP56851 147 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 CXCR4P61073 352 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 ERVK11-1P61568 191 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 CBX1P83916 185 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 NSUN5P1Q3KNT7 163 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 DNAL1Q4LDG9 190 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
PTPRE-203ENST00000442830 TMEM179BQ7Z7N9 219 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 SLC35F2Q8IXU6 374 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 CCDC197Q8NCU1 140 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 MRAPQ8TCY5 172 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 SGCDQ92629 289 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 R3HDM4Q96D70 268 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 SNX22Q96L94 193 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 CEP19Q96LK0 163 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 THTPAQ9BU02 230 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 GPR173Q9NS66 373 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 CLN6Q9NWW5 311 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
PTPRE-203ENST00000442830 SRSF10O75494 262 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms