RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 PMS2P11Q13670 270 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 SGCBQ16585 318 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 AARDQ4LEZ3 155 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 COL5A1-AS1Q5SY13 56 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 ZNF66Q6ZN08 573 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
LINC02048-201ENST00000440556 MARCH3Q86UD3 253 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 LGI3Q8N145 548 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 ARHGAP5-AS1Q96IT6 56 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 HDAC8Q9BY41 377 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 NAA60Q9H7X0 242 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 PLEKHF2Q9H8W4 249 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 HSF4Q9ULV5 492 aa12.06□□□□□ -0.48
LINC02048-201ENST00000440556 RCL1Q9Y2P8 373 aaKnown RBP12.06□□□□□ -0.48
LINC02048-201ENST00000440556 LMX1BO60663 402 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 MMP9P14780 707 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 SLC6A8P48029 635 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 IDH3GP51553 393 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 LIAT1Q6ZQX7 453 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 CENPVQ7Z7K6 275 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 GBGT1Q8N5D6 347 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 OR4N2Q8NGD1 307 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 PTPMT1Q8WUK0 201 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 TSLPQ969D9 159 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 OR5B12Q96R08 314 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 MOB1AQ9H8S9 216 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 Q9N2K0 584 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 LRIT1Q9P2V4 623 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 POLR3KQ9Y2Y1 108 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 TRPM6Q9BX84 2022 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 PRR19A6NJB7 356 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 B4E171 279 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 IL6RP08887 468 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 CDKN1BP46527 198 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 RPL29P47914 159 aaKnown RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 METAP1P53582 386 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 BAXQ07812 192 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 KIR2DS3Q14952 304 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 TCTN1Q2MV58 587 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 ACSF3Q4G176 576 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 FNDC7Q5VTL7 733 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 CA13Q8N1Q1 262 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 CISD2Q8N5K1 135 aaKnown RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 BCORP1Q8N888 145 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 C1orf147Q96MC9 270 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 CCDC3Q9BQI4 270 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 PHPT1Q9NRX4 125 aaPredicted RBP12.05□□□□□ -0.48
LINC02048-201ENST00000440556 SEMA5BQ9P283 1151 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 PILRAQ9UKJ1 303 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 GAB2Q9UQC2 676 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 MPDZO75970 2070 aa12.05□□□□□ -0.48
LINC02048-201ENST00000440556 SIAH2O43255 324 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 TNFSF13O75888 250 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 AHSA1O95433 338 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 CDS2O95674 445 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 HPRT1P00492 218 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 BCKDHBP21953 392 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 RAB11AP62491 216 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 SRPXP78539 464 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 ACKR1Q16570 336 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 HNRNPA1L2Q32P51 320 aaKnown RBP12.04□□□□□ -0.48
LINC02048-201ENST00000440556 ABCA11PQ4W5N1 156 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 ACTL10Q5JWF8 245 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 NCR3LG1Q68D85 454 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 GRINAQ7Z429 371 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 CMTM1Q8IZ96 169 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 OR4D5Q8NGN0 318 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 ADAT3Q96EY9 351 aaPredicted RBP12.04□□□□□ -0.48
LINC02048-201ENST00000440556 SLC46A1Q96NT5 459 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 MSL2Q9HCI7 577 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 FAM206AQ9NX38 181 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 CCL26Q9Y258 94 aa12.04□□□□□ -0.48
LINC02048-201ENST00000440556 TCRBV21S2A2A0A5A6 115 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 FOXI3A8MTJ6 420 aaPredicted RBP12.03□□□□□ -0.48
LINC02048-201ENST00000440556 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 XRCC2O43543 280 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
LINC02048-201ENST00000440556 IFNA1P01562 189 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 TTRP02766 147 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 TYMSP04818 313 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 CISD3P0C7P0 127 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 CTLA4P16410 223 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 RPP30P78346 268 aaKnown RBP12.03□□□□□ -0.48
LINC02048-201ENST00000440556 ZFP36L1Q07352 338 aaKnown RBP12.03□□□□□ -0.48
LINC02048-201ENST00000440556 SSX7Q7RTT5 188 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 SLC39A11Q8N1S5 342 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 TMEM52Q8NDY8 209 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 OR4C3Q8NH37 302 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 RNF133Q8WVZ7 376 aa12.03□□□□□ -0.48
LINC02048-201ENST00000440556 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
LINC02048-201ENST00000440556 FAAP24Q9BTP7 215 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms