RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 BORCS8Q96FH0 119 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 SDSLQ96GA7 329 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 MYCBPQ99417 103 aaPredicted RBP11.32□□□□□ -0.6
LTBR-202ENST00000440421 PKIBQ9C010 78 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 SIRT7Q9NRC8 400 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 OR14J1Q9UGF5 321 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 HHLA2Q9UM44 414 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 KPTNQ9Y664 436 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 STAB1Q9NY15 2570 aa11.32□□□□□ -0.6
LTBR-202ENST00000440421 IGHV1-69DA0A0B4J2H0 117 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 OR4C45A6NMZ5 311 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 E9PI62 339 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 PRTN3P24158 256 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 DLX1P56177 255 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 CAV3P56539 151 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 IL24Q13007 206 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 SLC9A3R2Q15599 337 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 KLHL22Q53GT1 634 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 SLC25A26Q70HW3 274 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 CMTM4Q8IZR5 234 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 SYS1Q8N2H4 156 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 PACRGLQ8N7B6 248 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 GATAD2BQ8WXI9 593 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 PP6455Q8WZ26 134 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 C10orf35Q96D05 121 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 ZNF649Q9BS31 505 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 HES4Q9HCC6 221 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 INPP5EQ9NRR6 644 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 MRPS18AQ9NVS2 196 aaKnown RBP11.31□□□□□ -0.6
LTBR-202ENST00000440421 MTCH1Q9NZJ7 389 aa11.31□□□□□ -0.6
LTBR-202ENST00000440421 IGKV1-9A0A0C4DH69 117 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 TMEM89A2RUT3 159 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 F8VVB4 439 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 F8VWA3 439 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 SLC1A7O00341 560 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
LTBR-202ENST00000440421 OCM2P0CE71 109 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 OCMP0CE72 109 aaPredicted RBP11.3□□□□□ -0.6
LTBR-202ENST00000440421 ATF1P18846 271 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 AZGP1P25311 298 aaKnown RBP11.3□□□□□ -0.6
LTBR-202ENST00000440421 GBX2P52951 348 aaPredicted RBP11.3□□□□□ -0.6
LTBR-202ENST00000440421 BPIFB3P59826 476 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 ERVK11-1P61568 191 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 TTC23Q5W5X9 447 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 FAM185AQ8N0U4 392 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 ZNF561Q8N587 486 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 DHRSXQ8N5I4 330 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 KIR3DL3Q8N743 410 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 CEP19Q96LK0 163 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 C8orf4Q9NR00 106 aa11.3□□□□□ -0.6
LTBR-202ENST00000440421 A0A1W2PRD5 423 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 A0A1W2PRF3 423 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 A0A1W2PRM7 423 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 HAX1O00165 279 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 ZFPL1O95159 310 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 KNG1P01042 644 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 PRKACBP22694 351 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 POU3F4P49335 361 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 RBP2P50120 134 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 ETV1P50549 477 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 ATP1B3P54709 279 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 MTCP1P56278 107 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 ADARB1P78563 741 aaKnown RBP11.29□□□□□ -0.6
LTBR-202ENST00000440421 KLRD1Q13241 179 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 UTS2BQ765I0 119 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 EGFL6Q8IUX8 553 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 Q8N7P7 452 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 SETD9Q8NE22 299 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 OR5AK2Q8NH90 309 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 SLC25A28Q96A46 364 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 RFT1Q96AA3 541 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 DMRTB1Q96MA1 342 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 PDCD1LG2Q9BQ51 273 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
LTBR-202ENST00000440421 C19orf12Q9NSK7 152 aa11.29□□□□□ -0.6
LTBR-202ENST00000440421 TRBV23-1A0A0A0MS06 115 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 A0A0U1RQK1 487 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 TMEM212A6NML5 194 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 RNASEK-C17orf49H0YIS7 233 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 SPRY1O43609 319 aaPredicted RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 RNASE1P07998 156 aaKnown RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 CCDC159P0C7I6 412 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 CALCBP10092 127 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 GTF2A1P52655 376 aaPredicted RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 COL10A1Q03692 680 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 MRPL28Q13084 256 aaKnown RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 BLMHQ13867 455 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 OGFRL1Q5TC84 451 aaPredicted RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 OR2G6Q5TZ20 316 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 ASCC1Q8N9N2 400 aaKnown RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 DNAAF1Q8NEP3 725 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 OR4M1Q8NGD0 313 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms