RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SDSLQ96GA7 329 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 JMJD8Q96S16 334 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 TBX15Q96SF7 602 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 DCTN5Q9BTE1 182 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 HES4Q9HCC6 221 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 MAB21L2Q9Y586 359 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 SOX21Q9Y651 276 aaPredicted RBP19.52■□□□□ 0.72
VARS-217ENST00000440048 ZFPL1O95159 310 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 CCDC159P0C7I6 412 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 ATF1P18846 271 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 ERVK11-1P61568 191 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 SLC34A1Q06495 639 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 C9orf139Q6ZV77 190 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 C8orf59Q8N0T1 100 aaPredicted RBP19.51■□□□□ 0.71
VARS-217ENST00000440048 CD177Q8N6Q3 437 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 ZNRF1Q8ND25 227 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 DNAAF1Q8NEP3 725 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 HAVCR2Q8TDQ0 301 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 ZFAND2BQ8WV99 257 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 H1FXQ92522 213 aaKnown RBP19.51■□□□□ 0.71
VARS-217ENST00000440048 VCXQ9H320 206 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 ESM1Q9NQ30 184 aa19.51■□□□□ 0.71
VARS-217ENST00000440048 DIMT1Q9UNQ2 313 aaKnown RBP19.51■□□□□ 0.71
VARS-217ENST00000440048 CAB39Q9Y376 341 aaPredicted RBP19.51■□□□□ 0.71
VARS-217ENST00000440048 TMEM212A6NML5 194 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 NDUFB7P17568 137 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 GTF2A1P52655 376 aaPredicted RBP19.5■□□□□ 0.71
VARS-217ENST00000440048 CAV3P56539 151 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 GPR157Q5UAW9 335 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 OR5AK2Q8NH90 309 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 C8orf46Q8TAG6 207 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 ZNF48Q96MX3 618 aaPredicted RBP19.5■□□□□ 0.71
VARS-217ENST00000440048 PDCD1LG2Q9BQ51 273 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 MTCH1Q9NZJ7 389 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 ANK2Q01484 3957 aa19.5■□□□□ 0.71
VARS-217ENST00000440048 TRBV2A0A0J9YWF9 115 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 PRKACBP22694 351 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 AZGP1P25311 298 aaKnown RBP19.49■□□□□ 0.71
VARS-217ENST00000440048 PRDX2P32119 198 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 RBP2P50120 134 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 ATP1B3P54709 279 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 OR2G6Q5TZ20 316 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 LAIR2Q6ISS4 152 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 RBMS3Q6XE24 437 aaKnown RBP19.49■□□□□ 0.71
VARS-217ENST00000440048 BRD3OSQ6XYD6 125 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 TMPRSS11AQ6ZMR5 421 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 SLC25A26Q70HW3 274 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.49■□□□□ 0.71
VARS-217ENST00000440048 ZDHHC22Q8N966 263 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 TMEM185AQ8NFB2 350 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 GGHQ92820 318 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 SLAMF9Q96A28 289 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 DMRTB1Q96MA1 342 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 COMMD4Q9H0A8 199 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 ELL3Q9HB65 397 aaPredicted RBP19.49■□□□□ 0.71
VARS-217ENST00000440048 ONECUT1Q9UBC0 465 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 EXOSC1Q9Y3B2 195 aaKnown RBP19.49■□□□□ 0.71
VARS-217ENST00000440048 KPTNQ9Y664 436 aa19.49■□□□□ 0.71
VARS-217ENST00000440048 F8VVB4 439 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 F8VWA3 439 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 RPSAP08865 295 aaKnown RBP19.48■□□□□ 0.71
VARS-217ENST00000440048 MYL12AP19105 171 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 CEBPDP49716 269 aaPredicted RBP19.48■□□□□ 0.71
VARS-217ENST00000440048 PDCD1Q15116 288 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 XAF1Q6GPH4 301 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 FBLIM1Q8WUP2 373 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 NRG4Q8WWG1 115 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 TFAP2CQ92754 450 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 SPSB1Q96BD6 273 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 TMEM80Q96HE8 168 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 CEP19Q96LK0 163 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 OR14J1Q9UGF5 321 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 CLEC2DQ9UHP7 191 aa19.48■□□□□ 0.71
VARS-217ENST00000440048 CENPVL3A0A0U1RRI6 287 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 TRIM77I1YAP6 450 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 INMTO95050 263 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 KNG1P01042 644 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 CAPZA1P52907 286 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 MTCP1P56278 107 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 RUSC1-AS1Q66K80 236 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 RPL22L1Q6P5R6 122 aaKnown RBP19.47■□□□□ 0.71
VARS-217ENST00000440048 LHFPL2Q6ZUX7 228 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 ZNF561Q8N587 486 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 KIR3DL3Q8N743 410 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 OR13C9Q8NGT0 318 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 LHX4Q969G2 390 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 OPALINQ96PE5 141 aa19.47■□□□□ 0.71
VARS-217ENST00000440048 MT-ND2P03891 347 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 BPIFB3P59826 476 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 ST3GAL4Q11206 333 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 CDK5R1Q15078 307 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 CCDC58Q4VC31 144 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 VMO1Q7Z5L0 202 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 CMTM4Q8IZR5 234 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 RPS4Y2Q8TD47 263 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 ZCCHC4Q9H5U6 513 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 DHDHQ9UQ10 334 aa19.46■□□□□ 0.71
VARS-217ENST00000440048 EFCAB10A6NFE3 127 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 SLC1A7O00341 560 aa19.45■□□□□ 0.7
VARS-217ENST00000440048 XPNPEP2O43895 674 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms