RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ZBTB37Q5TC79 503 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 OR1S2Q8NGQ3 325 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 HAS2Q92819 552 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 GALMQ96C23 342 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 C2orf50Q96LR7 162 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 CHRNA10Q9GZZ6 450 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 INTS1Q8N201 2190 aaKnown RBP10.82□□□□□ -0.68
TCOF1-205ENST00000439160 H3BP45 60 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 DNPH1O43598 174 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 ZNF17P17021 662 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 FAM122CQ6P4D5 195 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 OR6S1Q8NH40 331 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 FNDC1Q4ZHG4 1894 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-205ENST00000439160 C1orf196B1AJZ1 125 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 RAB4BP61018 213 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 SNTB1Q13884 538 aaKnown RBP10.82□□□□□ -0.68
TCOF1-205ENST00000439160 USF2Q15853 346 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-205ENST00000439160 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 SLC35G3Q8N808 338 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 OR2G3Q8NGZ4 309 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 FLVCR1-AS1Q8TAF5 88 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 HPSE2Q8WWQ2 592 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 S100PBPQ96BU1 408 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 TIMD4Q96H15 378 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 CHST6Q9GZX3 395 aa10.82□□□□□ -0.68
TCOF1-205ENST00000439160 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TGM6O95932 706 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 PNPP00491 289 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 NGFP01138 241 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 HPNP05981 417 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 ALDH3B1P43353 468 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TAS2R30P59541 319 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TAGLNQ01995 201 aaKnown RBP10.81□□□□□ -0.68
TCOF1-205ENST00000439160 MS4A18Q3C1V0 323 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 PLA1AQ53H76 456 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 FAM74A1Q5RGS3 127 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 CDCP2Q5VXM1 449 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 NAA40Q86UY6 237 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 DDA1Q9BW61 102 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-205ENST00000439160 FAM90A27PA6NNH2 459 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 K7ESF4 209 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 ZNF205O95201 554 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 ELLP55199 621 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-205ENST00000439160 NKX6-1P78426 367 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TEX261Q6UWH6 196 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 CISD2Q8N5K1 135 aaKnown RBP10.81□□□□□ -0.68
TCOF1-205ENST00000439160 SFT2D1Q8WV19 159 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 U3KQ87 197 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TCF20Q9UGU0 1960 aaKnown RBP10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TPPPO94811 219 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 AGFG2O95081 481 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 VSIG8P0DPA2 414 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 IAPPP10997 89 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 ADRA2CP18825 462 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 CHATP28329 748 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 MPGP29372 298 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 SVBPQ8N300 66 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 ZBTB44Q8NCP5 570 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 DUSP18Q8NEJ0 188 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 FBXW5Q969U6 566 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 WDR13Q9H1Z4 485 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 SLC7A10Q9NS82 523 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 ATPIF1Q9UII2 106 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 ERRFI1Q9UJM3 462 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-205ENST00000439160 IGKV3D-11A0A0A0MRZ8 115 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 SNAPINO95295 136 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 CD82P27701 267 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 LIMK1P53667 647 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TLE4Q04727 773 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 TESK1Q15569 626 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 OR10AD1Q8NGE0 317 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 OR10V1Q8NGI7 309 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 KCNK17Q96T54 332 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 MGAMO43451 1857 aa10.81□□□□□ -0.68
TCOF1-205ENST00000439160 IGLV1-36A0A0B4J1U3 117 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 C3orf80F5H4A9 247 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 DFFBO76075 338 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 APOA2P02652 100 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 RAB11AP62491 216 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 HLXQ14774 488 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-205ENST00000439160 SIGIRRQ6IA17 410 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 NHLRC1Q6VVB1 395 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 MRPL22Q9NWU5 206 aaKnown RBP10.8□□□□□ -0.68
TCOF1-205ENST00000439160 RALGAPA1Q6GYQ0 2036 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 GEMIN2O14893 280 aaKnown RBP10.8□□□□□ -0.68
TCOF1-205ENST00000439160 RECKO95980 971 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 Q8IYB0 196 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 OR10X1Q8NGY0 326 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 LIN7CQ9NUP9 197 aaKnown RBP10.8□□□□□ -0.68
TCOF1-205ENST00000439160 TINAGQ9UJW2 476 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 COL4A6Q14031 1691 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 GPR31O00270 319 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 FPR2P25090 351 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 IL3RAP26951 378 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 CALCRP30988 508 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 FBXW9Q5XUX1 488 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 OR5AP2Q8NGF4 316 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 PGLYRP3Q96LB9 341 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 S1PR3Q99500 378 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms