RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 H2AFY2Q9P0M6 372 aaPredicted RBP6.32□□□□□ -1.4
VPS50-203ENST00000436177 OR14J1Q9UGF5 321 aa6.32□□□□□ -1.4
VPS50-203ENST00000436177 NUFIP1Q9UHK0 495 aaKnown RBP6.32□□□□□ -1.4
VPS50-203ENST00000436177 PITPNC1Q9UKF7 332 aa6.32□□□□□ -1.4
VPS50-203ENST00000436177 SIGLEC9Q9Y336 463 aa6.32□□□□□ -1.4
VPS50-203ENST00000436177 AQP12BA6NM10 295 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 F2RL2O00254 374 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 PIN1P1O15428 100 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
VPS50-203ENST00000436177 KIR2DS4P43632 304 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 BMXP51813 675 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 EFNB2P52799 333 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 GYS2P54840 703 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 EDDM3BP56851 147 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 OR12D2P58182 307 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 MS4A2Q01362 244 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ROM1Q03395 351 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 DYNC1I2Q13409 638 aaKnown RBP6.31□□□□□ -1.4
VPS50-203ENST00000436177 FAM189A2Q15884 450 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 NSUN5P1Q3KNT7 163 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 DMRTC1Q5HYR2 192 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ZNF782Q6ZMW2 699 aaPredicted RBP6.31□□□□□ -1.4
VPS50-203ENST00000436177 Q6ZS46 218 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ASRGL1Q7L266 308 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 GDPD3Q7L5L3 318 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 TRPM8Q7Z2W7 1104 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 AQP12AQ8IXF9 295 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ZNF679Q8IYX0 411 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ADGRG5Q8IZF4 528 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 OR4F17Q8NGA8 305 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 OR4M1Q8NGD0 313 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 OR13D1Q8NGV5 346 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 OR2T27Q8NH04 317 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 PPP1R14AQ96A00 147 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ZNF488Q96MN9 340 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 OR4F4Q96R69 305 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 MNTQ99583 582 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 TEAD3Q99594 435 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 THTPAQ9BU02 230 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 FGF23Q9GZV9 251 aaPredicted RBP6.31□□□□□ -1.4
VPS50-203ENST00000436177 SLC25A19Q9HC21 320 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 PAPOLBQ9NRJ5 636 aaKnown RBP6.31□□□□□ -1.4
VPS50-203ENST00000436177 FAM206AQ9NX38 181 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 DNAJB9Q9UBS3 223 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ZNF222Q9UK12 451 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 FOXJ3Q9UPW0 622 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 SLC7A11Q9UPY5 501 aa6.31□□□□□ -1.4
VPS50-203ENST00000436177 ZNF670-ZNF695F2Z2N8 137 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 G3V4G9 280 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 DLGAP1O14490 977 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 GATBO75879 557 aaKnown RBP6.3□□□□□ -1.4
VPS50-203ENST00000436177 CYB5AP00167 134 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 ARG1P05089 322 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 KRT8P05787 483 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 OCM2P0CE71 109 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 OCMP0CE72 109 aaPredicted RBP6.3□□□□□ -1.4
VPS50-203ENST00000436177 PGA5P0DJD9 388 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 ZNF728P0DKX0 622 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 CCL3L1P16619 93 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 PRKACGP22612 351 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 SLC2A5P22732 501 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 CEBPDP49716 269 aaPredicted RBP6.3□□□□□ -1.4
VPS50-203ENST00000436177 ARHGDIBP52566 201 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 HCCSP53701 268 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 CDK5Q00535 292 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 EMX1Q04741 257 aaPredicted RBP6.3□□□□□ -1.4
VPS50-203ENST00000436177 CNN3Q15417 329 aaKnown RBP6.3□□□□□ -1.4
VPS50-203ENST00000436177 DNAL1Q4LDG9 190 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 TMEM236Q5W0B7 351 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 TMEM200BQ69YZ2 307 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 ZNF322Q6U7Q0 402 aaPredicted RBP6.3□□□□□ -1.4
VPS50-203ENST00000436177 HS3ST5Q8IZT8 346 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 PPP1R35Q8TAP8 253 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 NDNFQ8TB73 568 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 CANT1Q8WVQ1 401 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 C17orf50Q8WW18 174 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 SGCDQ92629 289 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 R3HDM4Q96D70 268 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 OR8B4Q96RC9 309 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 NRIP2Q9BQI9 281 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 ADI1Q9BV57 179 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 CDCA4Q9BXL8 241 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 PRSS22Q9GZN4 317 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 GPR173Q9NS66 373 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 ENOPH1Q9UHY7 261 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 SLC22A13Q9Y226 551 aa6.3□□□□□ -1.4
VPS50-203ENST00000436177 FAM230AA0A1W2PPH8 454 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 PQLC2LA1A4F0 135 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 DHRS7CA6NNS2 312 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 GYG2O15488 501 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 SYNGR1O43759 233 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 CHST1O43916 411 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 FKBP6O75344 327 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 SERPINA3P01011 423 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 RBP4P02753 201 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 TK1P04183 234 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 CHRM2P08172 466 aa6.29□□□□□ -1.4
VPS50-203ENST00000436177 PAX6P26367 422 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms