RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RPL36A-HNRNPH2H7BZ11 118 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 CTLA4P16410 223 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 BTG2P78543 158 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 P2RY6Q15077 328 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 HIKESHIQ53FT3 197 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM217Q8N7C4 229 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 OR52A1Q9UKL2 312 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 RANBP2P49792 3224 aaKnown RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 MPPED1O15442 326 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SELEP16581 610 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 POLR2HP52434 150 aaKnown RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SLC37A1P57057 533 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 FXYD4P59646 89 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 ERVS71-1P61550 626 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 RUNX1Q01196 453 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 FZD2Q14332 565 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 CEBPEQ15744 281 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SPRED2Q7Z698 418 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 MBD3L1Q8WWY6 194 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 IGSF21Q96ID5 467 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 LMF2Q9BU23 707 aaKnown RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 MBNL1Q9NR56 388 aaKnown RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SPHK2Q9NRA0 654 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 C1orf123Q9NWV4 160 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SLC7A11Q9UPY5 501 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 DVL1O14640 695 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 TOX4O94842 621 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 H2BFMP0C1H6 154 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 CST5P28325 142 aaPredicted RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 WNT5AP41221 380 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 OR3A1P47881 315 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 IL15RAQ13261 267 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 RTL6Q6ICC9 239 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 Q7L0L9 218 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SFTPA1Q8IWL2 248 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 MFSD9Q8NBP5 474 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 ADAT3Q96EY9 351 aaPredicted RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SCGB3A2Q96PL1 93 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 OR8D2Q9GZM6 311 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 VN1R1Q9GZP7 353 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 GPR173Q9NS66 373 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF107Q9UII5 783 aaPredicted RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 SDK1Q7Z5N4 2213 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 FAM24AA6NFZ4 105 aa6.59□□□□□ -1.36
CPSF6-202ENST00000435070 CD55P08174 381 aa6.59□□□□□ -1.36
CPSF6-202ENST00000435070 FPR2P25090 351 aa6.59□□□□□ -1.36
CPSF6-202ENST00000435070 CD81P60033 236 aa6.59□□□□□ -1.36
CPSF6-202ENST00000435070 MMP25Q9NPA2 562 aa6.59□□□□□ -1.36
CPSF6-202ENST00000435070 SUSD2Q9UGT4 822 aa6.59□□□□□ -1.36
CPSF6-202ENST00000435070 COA3Q9Y2R0 106 aaPredicted RBP6.59□□□□□ -1.36
CPSF6-202ENST00000435070 TOX3O15405 576 aaPredicted RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CCR2P41597 374 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 P2RY1P47900 373 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CHRFAM7AQ494W8 412 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 PHLDA2Q53GA4 152 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 FHL5Q5TD97 284 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 LINC00114Q6XXX2 140 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 LYZL2Q7Z4W2 148 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 SULF2Q8IWU5 870 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 TMEM183AQ8IXX5 376 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 DTWD2Q8NBA8 298 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 OR1P1Q8NH06 330 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ADAMTS18Q8TE60 1221 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 SLC2A9Q9NRM0 540 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 PPIAL4AQ9Y536 164 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 GPR75O95800 540 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF93P35789 620 aaPredicted RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 HLA-DRB3P79483 266 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 GLO1Q04760 184 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 PRSS8Q16651 343 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 NPSR1Q6W5P4 371 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 TSACCQ96A04 125 aaPredicted RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 DNAJC5Q9H3Z4 198 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 PRTFDC1Q9NRG1 225 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 F5P12259 2224 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 A0A0A6YYD4 124 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CTSVO60911 334 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 RPLP1P05386 114 aaKnown RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 POU2F2P09086 479 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 IGFBP3P17936 291 aaPredicted RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ATP6V0CP27449 155 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ELLP55199 621 aaPredicted RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 HNF4GQ14541 408 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 TCTN1Q2MV58 587 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 FBXW12Q6X9E4 464 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 DCXRQ7Z4W1 244 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 RSC1A1Q92681 617 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ANKRD9Q96BM1 317 aaPredicted RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF524Q96C55 264 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 MAGT1Q9H0U3 335 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 OR51B6Q9H340 312 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 B4GALT7Q9UBV7 327 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 KIAA2026Q5HYC2 2103 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CACNA1DQ01668 2161 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ANKUB1A6NFN9 424 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 SIAH2O43255 324 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 NUDT21O43809 227 aaKnown RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CST7O76096 145 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CST2P09228 141 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF17P17021 662 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms