RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 IL34Q6ZMJ4 242 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 FAM71E2Q8N5Q1 922 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 OR2Y1Q8NGV0 311 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 OR1F12Q8NHA8 337 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 SMIM8Q96KF7 97 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 CMSS1Q9BQ75 279 aaKnown RBP10.27□□□□□ -0.76
CD44-209ENST00000433892 RHOFQ9HBH0 211 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 LHX6Q9UPM6 363 aa10.27□□□□□ -0.76
CD44-209ENST00000433892 CARHSP1Q9Y2V2 147 aaKnown RBP10.27□□□□□ -0.76
CD44-209ENST00000433892 LSM5Q9Y4Y9 91 aaKnown RBP10.27□□□□□ -0.76
CD44-209ENST00000433892 AGPAT2O15120 278 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 SCGB1D2O95969 90 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 GLI4P10075 376 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 MUC1P15941 1255 aaPredicted RBP10.27□□□□□ -0.77
CD44-209ENST00000433892 ZNF32P17041 273 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 ECI1P42126 302 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 PIGPP57054 158 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 MLF1P58340 268 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 RAC3P60763 192 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 PIGYQ3MUY2 71 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 GGNBP1Q5YKI7 109 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 PMS2CLQ68D20 193 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.27□□□□□ -0.77
CD44-209ENST00000433892 GPR137CQ8N3F9 429 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 OR14L1PQ8NHC6 308 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 SULT4A1Q9BR01 284 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 SMIM3Q9BZL3 60 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 EDARQ9UNE0 448 aa10.27□□□□□ -0.77
CD44-209ENST00000433892 CCDC85CA6NKD9 419 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 TAAR5O14804 337 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 GEMIN2O14893 280 aaKnown RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 DEDDO75618 318 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 FARS2O95363 451 aaKnown RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 IFNA21P01568 189 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 FCGR3AP08637 254 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 FCGR2CP31995 323 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 HTR5AP47898 357 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 NPBWR1P48145 328 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 RBP2P50120 134 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 CARD18P57730 90 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 B3GALT5-AS1P59052 145 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 FXYD4P59646 89 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 PDCD1Q15116 288 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 TSPO2Q5TGU0 170 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 CLEC9AQ6UXN8 241 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 CCDC54Q8NEL0 328 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 NTNG2Q96CW9 530 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 SAT2Q96F10 170 aaPredicted RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 BORCS8Q96FH0 119 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 MARS2Q96GW9 593 aaKnown RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 TMEM38BQ9NVV0 291 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 FBXL17Q9UF56 701 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 IGKV1-12A0A0C4DH73 117 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 GJE1A6NN92 205 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 PATE3B3GLJ2 98 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 H7C2Y5 167 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 IGKV1D-12P01611 117 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 RFPL3SP0C7P2 107 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 CHATP28329 748 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 ID4P47928 161 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 CAV2P51636 162 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 TMEM33P57088 247 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 EIF5AP63241 154 aaKnown RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 SMCO1Q147U7 214 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 CNN3Q15417 329 aaKnown RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 SPAG16Q8N0X2 631 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 OR10AD1Q8NGE0 317 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 FGFBP3Q8TAT2 258 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 PRRX2Q99811 253 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 SF3B5Q9BWJ5 86 aaKnown RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 SEC11CQ9BY50 192 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 SAV1Q9H4B6 383 aaPredicted RBP10.26□□□□□ -0.77
CD44-209ENST00000433892 DECR2Q9NUI1 292 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 NECAP2Q9NVZ3 263 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 TUBD1Q9UJT1 453 aa10.26□□□□□ -0.77
CD44-209ENST00000433892 CXCL13O43927 109 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 CST4P01036 141 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 NRASP01111 189 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 CST2P09228 141 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 H2AFB1P0C5Y9 115 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 OR5AC1P0C628 307 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 ZNF728P0DKX0 622 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
CD44-209ENST00000433892 RPS18P62269 152 aaKnown RBP10.25□□□□□ -0.77
CD44-209ENST00000433892 PSG4Q00888 419 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
CD44-209ENST00000433892 HFEQ30201 348 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 PHLDA2Q53GA4 152 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 GGNQ86UU5 652 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 FBXL14Q8N1E6 418 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 MAFAQ8NHW3 353 aaPredicted RBP10.25□□□□□ -0.77
CD44-209ENST00000433892 NRIP2Q9BQI9 281 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 PARP12Q9H0J9 701 aaKnown RBP10.25□□□□□ -0.77
CD44-209ENST00000433892 RCC2Q9P258 522 aaKnown RBP10.25□□□□□ -0.77
CD44-209ENST00000433892 NDRG3Q9UGV2 375 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 HSF4Q9ULV5 492 aa10.25□□□□□ -0.77
CD44-209ENST00000433892 KIAA1549Q9HCM3 1950 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms