RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 HPNP05981 417 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 IRF2P14316 349 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 RPS11P62280 158 aaKnown RBP eCLIP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 TRIM61Q5EBN2 209 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ARSKQ6UWY0 536 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 TMPRSS9Q7Z410 1059 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 TRAPPC6BQ86SZ2 158 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 CMTM4Q8IZR5 234 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 C8orf31Q8N9H6 132 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ST8SIA2Q92186 375 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 TNFRSF14Q92956 283 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ANAPC10Q9UM13 185 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 SF3B6Q9Y3B4 125 aaKnown RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ZIC2O95409 532 aaPredicted RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 MAKP20794 623 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 CSRP1P21291 193 aaKnown RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 EGR4Q05215 589 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 FUT5Q11128 374 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 OR2G3Q8NGZ4 309 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ABHD3Q8WU67 409 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 PTPMT1Q8WUK0 201 aaPredicted RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 WNT2BQ93097 391 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ACTR3CQ9C0K3 210 aaPredicted RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 NKX2-4Q9H2Z4 354 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 VSIG4Q9Y279 399 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 LOXL2Q9Y4K0 774 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 LRP12Q9Y561 859 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 CDX4O14627 284 aaPredicted RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 RPLP1P05386 114 aaKnown RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 CTLA4P16410 223 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 S100A10P60903 97 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 C11orf87Q6NUJ2 197 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF585AQ6P3V2 769 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF695Q8IW36 515 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 OR52E5Q8NH55 327 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 SMIM12Q96EX1 92 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 NAA50Q9GZZ1 169 aaKnown RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 LIN28AQ9H9Z2 209 aaKnown RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 CENPMQ9NSP4 180 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 FLRT3Q9NZU0 649 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 MYEF2Q9P2K5 600 aaKnown RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 PRNDQ9UKY0 176 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 OR2W1Q9Y3N9 320 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 C20orf202A1L168 122 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 A8MXK9 166 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 RAB27BO00194 218 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 IL18BPO95998 194 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 MAT1AQ00266 395 aaKnown RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 ATPAF1Q5TC12 328 aaPredicted RBP3.33□□□□□ -1.88
SHPRH-205ENST00000433355 OR2G6Q5TZ20 316 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 C19orf35Q6ZS72 473 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 COMMD7Q86VX2 200 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 OR8D4Q8NGM9 314 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 RASL10BQ96S79 203 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 STARD10Q9Y365 291 aa3.33□□□□□ -1.88
SHPRH-205ENST00000433355 TRBV11-1A0A0K0K1C0 115 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 MAS1P04201 325 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 GATA4P43694 442 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 NPY4RP50391 375 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 LUMP51884 338 aaPredicted RBP3.32□□□□□ -1.88
SHPRH-205ENST00000433355 RUNX2Q13950 521 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 GAB4Q2WGN9 574 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 KHDC3LQ587J8 217 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM99Q8N816 258 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 SAP25Q8TEE9 199 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 WBP2Q969T9 261 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 SLC25A28Q96A46 364 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 FGGYQ96C11 551 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 ANAPC16Q96DE5 110 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 GNRHR2Q96P88 292 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 PPIL3Q9H2H8 161 aaKnown RBP3.32□□□□□ -1.88
SHPRH-205ENST00000433355 MBNL1Q9NR56 388 aaKnown RBP3.32□□□□□ -1.88
SHPRH-205ENST00000433355 EML5Q05BV3 1969 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 A0A1W2PN81 502 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 MSTNO14793 375 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 TM4SF5O14894 197 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 PITX3O75364 302 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 CHRNA7P36544 502 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 ENDOGQ14249 297 aaKnown RBP3.32□□□□□ -1.88
SHPRH-205ENST00000433355 TAF9Q16594 264 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 GUCA2BQ16661 112 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 FBXW9Q5XUX1 488 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 Q6AWC8 147 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 CCDC144NLQ6NUI1 221 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 NKAIN4Q8IVV8 208 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 FOXRED2Q8IWF2 684 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 ZADH2Q8N4Q0 377 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 OR4C16Q8NGL9 310 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 PTP4A1Q93096 173 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 TXN2Q99757 166 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.32□□□□□ -1.88
SHPRH-205ENST00000433355 LY96Q9Y6Y9 160 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 SERTM2A0A1B0GWG4 89 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 RPS10-NUDT3A0A1W2PQS6 291 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 CCSO14618 274 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 CSN2P05814 226 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 PTNP21246 168 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 GABRA4P48169 554 aa3.32□□□□□ -1.88
SHPRH-205ENST00000433355 MRPS11P82912 194 aaKnown RBP3.32□□□□□ -1.88
SHPRH-205ENST00000433355 LINC01590Q5TEZ4 76 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms